Literature DB >> 20627163

Magnetic tweezers for the study of DNA tracking motors.

Maria Manosas1, Adrien Meglio, Michelle M Spiering, Fangyuan Ding, Stephen J Benkovic, François-Xavier Barre, Omar A Saleh, Jean François Allemand, David Bensimon, Vincent Croquette.   

Abstract

Single-molecule manipulation methods have opened a new vista on the study of molecular motors. Here we describe the use of magnetic traps for the investigation of the mechanism of DNA based motors, in particular helicases and translocases. Copyright (c) 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID： 20627163      PMCID： PMC3205452          DOI： 10.1016/S0076-6879(10)75013-8

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


  19 in total

1.  The mechanochemistry of molecular motors.

Authors:  D Keller; C Bustamante
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

Review 2.  A general model for nucleic acid helicases and their "coupling" within macromolecular machines.

Authors:  P H von Hippel; E Delagoutte
Journal:  Cell       Date:  2001-01-26       Impact factor: 41.582

3.  FtsK Is a DNA motor protein that activates chromosome dimer resolution by switching the catalytic state of the XerC and XerD recombinases.

Authors:  Laurent Aussel; François Xavier Barre; Mira Aroyo; Andrzej Stasiak; Alicja Z Stasiak; David Sherratt
Journal:  Cell       Date:  2002-01-25       Impact factor: 41.582

4.  Magnetic tweezers: micromanipulation and force measurement at the molecular level.

Authors:  Charlie Gosse; Vincent Croquette
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

5.  Single-molecule DNA nanomanipulation: detection of promoter-unwinding events by RNA polymerase.

Authors:  A Revyakin; J F Allemand; V Croquette; R H Ebright; T R Strick
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

6.  NS3 helicase actively separates RNA strands and senses sequence barriers ahead of the opening fork.

Authors:  Wei Cheng; Sophie Dumont; Ignacio Tinoco; Carlos Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-20       Impact factor: 11.205

7.  Real-time observation of bacteriophage T4 gp41 helicase reveals an unwinding mechanism.

Authors:  Timothée Lionnet; Michelle M Spiering; Stephen J Benkovic; David Bensimon; Vincent Croquette
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-05       Impact factor: 11.205

Review 8.  Helicase mechanisms and the coupling of helicases within macromolecular machines. Part I: Structures and properties of isolated helicases.

Authors:  Emmanuelle Delagoutte; Peter H von Hippel
Journal:  Q Rev Biophys       Date:  2002-11       Impact factor: 5.318

Review 9.  Helicase mechanisms and the coupling of helicases within macromolecular machines. Part II: Integration of helicases into cellular processes.

Authors:  Emmanuelle Delagoutte; Peter H von Hippel
Journal:  Q Rev Biophys       Date:  2003-02       Impact factor: 5.318

10.  Coupling DNA unwinding activity with primer synthesis in the bacteriophage T4 primosome.

Authors:  Maria Manosas; Michelle M Spiering; Zhihao Zhuang; Stephen J Benkovic; Vincent Croquette
Journal:  Nat Chem Biol       Date:  2009-10-18       Impact factor: 15.040
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  13 in total

1.  High Spatiotemporal-Resolution Magnetic Tweezers: Calibration and Applications for DNA Dynamics.

Authors:  David Dulin; Tao Ju Cui; Jelmer Cnossen; Margreet W Docter; Jan Lipfert; Nynke H Dekker
Journal:  Biophys J       Date:  2015-11-17       Impact factor: 4.033

2.  Magnetic Tweezers-Based Single-Molecule Assays to Study Interaction of E. coli SSB with DNA and RecQ Helicase.

Authors:  Debjani Bagchi; Weiting Zhang; Samar Hodeib; Bertrand Ducos; Vincent Croquette; Maria Manosas
Journal:  Methods Mol Biol       Date:  2021

3.  The intrinsically disordered linker of E. coli SSB is critical for the release from single-stranded DNA.

Authors:  Hui Yin Tan; Luke A Wilczek; Sasheen Pottinger; Maria Manosas; Cong Yu; Trong Nguyenduc; Piero R Bianco
Journal:  Protein Sci       Date:  2017-03-08       Impact factor: 6.725

4.  Invincible DNA tethers: covalent DNA anchoring for enhanced temporal and force stability in magnetic tweezers experiments.

Authors:  Richard Janissen; Bojk A Berghuis; David Dulin; Max Wink; Theo van Laar; Nynke H Dekker
Journal:  Nucleic Acids Res       Date:  2014-08-19       Impact factor: 16.971

Review 5.  Molecular motors for DNA translocation in prokaryotes.

Authors:  Jean-François Allemand; Berenike Maier; Douglas E Smith
Journal:  Curr Opin Biotechnol       Date:  2012-01-07       Impact factor: 9.740

6.  Nanopore tweezers measurements of RecQ conformational changes reveal the energy landscape of helicase motion.

Authors:  Jonathan M Craig; Maria Mills; Hwanhee C Kim; Jesse R Huang; Sarah J Abell; Jonathan W Mount; Jens H Gundlach; Keir C Neuman; Andrew H Laszlo
Journal:  Nucleic Acids Res       Date:  2022-10-14       Impact factor: 19.160

7.  Single molecule measurements of DNA helicase activity with magnetic tweezers and t-test based step-finding analysis.

Authors:  Yeonee Seol; Marie-Paule Strub; Keir C Neuman
Journal:  Methods       Date:  2016-04-27       Impact factor: 3.608

8.  Lab-on-a-chip technologies for single-molecule studies.

Authors:  Yanhui Zhao; Danqi Chen; Hongjun Yue; Jarrod B French; Joseph Rufo; Stephen J Benkovic; Tony Jun Huang
Journal:  Lab Chip       Date:  2013-05-14       Impact factor: 6.799

Review 9.  Stalled replication fork rescue requires a novel DNA helicase.

Authors:  Piero Bianco
Journal:  Methods       Date:  2016-06-06       Impact factor: 3.608

10.  Direct observation of stalled fork restart via fork regression in the T4 replication system.

Authors:  Maria Manosas; Senthil K Perumal; Vincent Croquette; Stephen J Benkovic
Journal:  Science       Date:  2012-11-30       Impact factor: 47.728
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