Literature DB >> 20616070

Clostridium ljungdahlii represents a microbial production platform based on syngas.

Michael Köpke1, Claudia Held, Sandra Hujer, Heiko Liesegang, Arnim Wiezer, Antje Wollherr, Armin Ehrenreich, Wolfgang Liebl, Gerhard Gottschalk, Peter Dürre.   

Abstract

Clostridium ljungdahlii is an anaerobic homoacetogen, able to ferment sugars, other organic compounds, or CO(2)/H(2) and synthesis gas (CO/H(2)). The latter feature makes it an interesting microbe for the biotech industry, as important bulk chemicals and proteins can be produced at the expense of CO(2), thus combining industrial needs with sustained reduction of CO and CO(2) in the atmosphere. Sequencing the complete genome of C. ljungdahlii revealed that it comprises 4,630,065 bp and is one of the largest clostridial genomes known to date. Experimental data and in silico comparisons revealed a third mode of anaerobic homoacetogenic metabolism. Unlike other organisms such as Moorella thermoacetica or Acetobacterium woodii, neither cytochromes nor sodium ions are involved in energy generation. Instead, an Rnf system is present, by which proton translocation can be performed. An electroporation procedure has been developed to transform the organism with plasmids bearing heterologous genes for butanol production. Successful expression of these genes could be demonstrated, leading to formation of the biofuel. Thus, C. ljungdahlii can be used as a unique microbial production platform based on synthesis gas and carbon dioxide/hydrogen mixtures.

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Year:  2010        PMID: 20616070      PMCID: PMC2919952          DOI: 10.1073/pnas.1004716107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Fast algorithms for large-scale genome alignment and comparison.

Authors:  Arthur L Delcher; Adam Phillippy; Jane Carlton; Steven L Salzberg
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

2.  Solar fuels. Sunlight in your tank.

Authors:  Robert F Service
Journal:  Science       Date:  2009-12-11       Impact factor: 47.728

3.  Indirect emissions from biofuels: how important?

Authors:  Jerry M Melillo; John M Reilly; David W Kicklighter; Angelo C Gurgel; Timothy W Cronin; Sergey Paltsev; Benjamin S Felzer; Xiaodong Wang; Andrei P Sokolov; C Adam Schlosser
Journal:  Science       Date:  2009-10-22       Impact factor: 47.728

4.  High efficiency transformation of E. coli by high voltage electroporation.

Authors:  W J Dower; J F Miller; C W Ragsdale
Journal:  Nucleic Acids Res       Date:  1988-07-11       Impact factor: 16.971

5.  Catalysis at a dinuclear [CuSMo(==O)OH] cluster in a CO dehydrogenase resolved at 1.1-A resolution.

Authors:  Holger Dobbek; Lothar Gremer; Reiner Kiefersauer; Robert Huber; Ortwin Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-10       Impact factor: 11.205

6.  Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.

Authors:  P S Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  1980-09       Impact factor: 11.205

7.  Construction and characterization of pta gene-deleted mutant of Clostridium tyrobutyricum for enhanced butyric acid fermentation.

Authors:  Ying Zhu; Xiaoguang Liu; Shang-Tian Yang
Journal:  Biotechnol Bioeng       Date:  2005-04-20       Impact factor: 4.530

8.  Environmental life cycle comparison of algae to other bioenergy feedstocks.

Authors:  Andres F Clarens; Eleazer P Resurreccion; Mark A White; Lisa M Colosi
Journal:  Environ Sci Technol       Date:  2010-03-01       Impact factor: 9.028

Review 9.  Old acetogens, new light.

Authors:  Harold L Drake; Anita S Gössner; Steven L Daniel
Journal:  Ann N Y Acad Sci       Date:  2008-03       Impact factor: 5.691

10.  The ClosTron: a universal gene knock-out system for the genus Clostridium.

Authors:  John T Heap; Oliver J Pennington; Stephen T Cartman; Glen P Carter; Nigel P Minton
Journal:  J Microbiol Methods       Date:  2007-06-18       Impact factor: 2.363

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  145 in total

Review 1.  Biochemistry, evolution and physiological function of the Rnf complex, a novel ion-motive electron transport complex in prokaryotes.

Authors:  Eva Biegel; Silke Schmidt; José M González; Volker Müller
Journal:  Cell Mol Life Sci       Date:  2010-11-12       Impact factor: 9.261

2.  A versatile method for preparation of hydrated microbial-latex biocatalytic coatings for gas absorption and gas evolution.

Authors:  Jimmy L Gosse; Mari S Chinn; Amy M Grunden; Oscar I Bernal; Jessica S Jenkins; Chris Yeager; Sergey Kosourov; Michael Seibert; Michael C Flickinger
Journal:  J Ind Microbiol Biotechnol       Date:  2012-05-17       Impact factor: 3.346

3.  Complete genome sequence of a carbon monoxide-utilizing acetogen, Eubacterium limosum KIST612.

Authors:  Hanseong Roh; Hyeok-Jin Ko; Daehee Kim; Dong Geon Choi; Shinyoung Park; Sujin Kim; In Seop Chang; In-Geol Choi
Journal:  J Bacteriol       Date:  2010-10-29       Impact factor: 3.490

4.  Microbial engineering for the production of advanced biofuels.

Authors:  Pamela P Peralta-Yahya; Fuzhong Zhang; Stephen B del Cardayre; Jay D Keasling
Journal:  Nature       Date:  2012-08-16       Impact factor: 49.962

5.  Reconstruction of an acetogenic 2,3-butanediol pathway involving a novel NADPH-dependent primary-secondary alcohol dehydrogenase.

Authors:  Michael Köpke; Monica L Gerth; Danielle J Maddock; Alexander P Mueller; FungMin Liew; Séan D Simpson; Wayne M Patrick
Journal:  Appl Environ Microbiol       Date:  2014-03-21       Impact factor: 4.792

6.  Homolactic Acid Fermentation by the Genetically Engineered Thermophilic Homoacetogen Moorella thermoacetica ATCC 39073.

Authors:  Yuki Iwasaki; Akihisa Kita; Koichiro Yoshida; Takahisa Tajima; Shinichi Yano; Tomohiro Shou; Masahiro Saito; Junichi Kato; Katsuji Murakami; Yutaka Nakashimada
Journal:  Appl Environ Microbiol       Date:  2017-03-31       Impact factor: 4.792

7.  Genome Diversity of Spore-Forming Firmicutes.

Authors:  Michael Y Galperin
Journal:  Microbiol Spectr       Date:  2013-12

8.  A widely distributed metalloenzyme class enables gut microbial metabolism of host- and diet-derived catechols.

Authors:  Vayu Maini Rekdal; Paola Nol Bernadino; Michael U Luescher; Sina Kiamehr; Chip Le; Jordan E Bisanz; Peter J Turnbaugh; Elizabeth N Bess; Emily P Balskus
Journal:  Elife       Date:  2020-02-18       Impact factor: 8.140

9.  Genomic analysis of carbon monoxide utilization and butanol production by Clostridium carboxidivorans strain P7.

Authors:  Guillaume Bruant; Marie-Josée Lévesque; Chardeen Peter; Serge R Guiot; Luke Masson
Journal:  PLoS One       Date:  2010-09-27       Impact factor: 3.240

10.  Functional Expression of the Clostridium ljungdahlii Acetyl-Coenzyme A Synthase in Clostridium acetobutylicum as Demonstrated by a Novel In Vivo CO Exchange Activity En Route to Heterologous Installation of a Functional Wood-Ljungdahl Pathway.

Authors:  Alan G Fast; Eleftherios T Papoutsakis
Journal:  Appl Environ Microbiol       Date:  2018-03-19       Impact factor: 4.792

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