Literature DB >> 20607328

Bone mineral density is linked to 1p36 and 7p15-13 in a southern Chinese population.

Hoi Yee Gloria Li1, Wai Chee Annie Kung, Qing Yang Huang.   

Abstract

Genome-wide linkage scans have identified a number of quantitative trait loci (QTLs) affecting bone mineral density (BMD), mainly in the Caucasian population. In this study, we aim to determine whether seven well-replicated QTLs also contribute to BMD variation in the southern Han Chinese population. Thirty-three microsatellite markers in the proximity of seven QTLs were genotyped in 1,459 subjects from 306 families ascertained through a proband with BMD Z-score equal to or less than -1.3 at either the lumbar spine or hip. Regression-based multipoint linkage analysis was performed. In the entire study population, good linkage evidence of total hip BMD to 7p14 [maximum log of odds (LOD) score (MLS) = 2.75; nominal P = 0.0002] and 1p36 (MLS = 1.6, P = 0.003) was revealed. In the subgroup analysis of 1,166 female subjects, MLS of 3.42, 2.65, 2.42, and 1.54 were obtained on 7p12 for total hip, lumbar spine, trochanter, and femoral neck BMD, respectively. A suggestive linkage signal was achieved at 7p14-15 with a MLS of 3.38 and 3.15 for trochanter and total hip BMD in the 678 premenopausal women, and at 7p12 for femoral neck and total hip BMD with MLS of 2.22 and 3.04 in postmenopausal women. Subgroup analysis of premenopausal women also provided additional evidence of suggestive linkage of total hip BMD to 1p36, with a MLS of 2.84 at 17.07 cM. Thus, linkage of BMD to 1p36 and 7p15-13 is confirmed in southern Chinese. Computational prioritization strategy and published genome-wide association studies suggested RERE and SFRP4 as two promising candidate genes in which variants responsible for the linkage signal may be identified by follow-up gene-wide association studies.

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Year:  2010        PMID: 20607328     DOI: 10.1007/s00774-010-0195-y

Source DB:  PubMed          Journal:  J Bone Miner Metab        ISSN: 0914-8779            Impact factor:   2.626


  29 in total

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Authors:  H Shen; Y-Y Zhang; J-R Long; F-H Xu; Y-Z Liu; P Xiao; L-J Zhao; D-H Xiong; Y-J Liu; V Dvornyk; S Rocha-Sanchez; P-Y Liu; J-L Li; T Conway; K M Davies; R R Recker; H-W Deng
Journal:  J Med Genet       Date:  2004-10       Impact factor: 6.318

2.  PEDSTATS: descriptive statistics, graphics and quality assessment for gene mapping data.

Authors:  Janis E Wigginton; Gonçalo R Abecasis
Journal:  Bioinformatics       Date:  2005-06-09       Impact factor: 6.937

3.  Confirmation of linkage to chromosome 1q for spine bone mineral density in southern Chinese.

Authors:  Ching-Lung Cheung; Qing-Yang Huang; Mandy Y M Ng; Vivian Chan; Pak C Sham; Annie W C Kung
Journal:  Hum Genet       Date:  2006-07-18       Impact factor: 4.132

4.  Large-scale genome-wide linkage analysis for loci linked to BMD at different skeletal sites in extreme selected sibships.

Authors:  Yi-Hsiang Hsu; Xin Xu; Henry A Terwedow; Tianhua Niu; Xuimei Hong; Di Wu; Lihua Wang; Joseph D Brain; Mary L Bouxsein; Steve R Cummings; Cliff J Rosen; Xiping Xu
Journal:  J Bone Miner Res       Date:  2007-02       Impact factor: 6.741

5.  Identification of two sex-specific quantitative trait loci in chromosome 11q for hip bone mineral density in Chinese.

Authors:  Qing-Yang Huang; Mandy Y M Ng; Ching-Lung Cheung; Vivian Chan; Pak-Chung Sham; Annie W C Kung
Journal:  Hum Hered       Date:  2006-08-21       Impact factor: 0.444

6.  Secreted frizzled-related protein 4 is a negative regulator of peak BMD in SAMP6 mice.

Authors:  Rika Nakanishi; Motoyuki Shimizu; Masayuki Mori; Haruhiko Akiyama; Shuzo Okudaira; Bungo Otsuki; Maiko Hashimoto; Keiichi Higuchi; Masanori Hosokawa; Tadao Tsuboyama; Takashi Nakamura
Journal:  J Bone Miner Res       Date:  2006-11       Impact factor: 6.741

7.  Loci for regulation of bone mineral density in men and women identified by genome wide linkage scan: the FAMOS study.

Authors:  Stuart H Ralston; Nick Galwey; Ian MacKay; Omar M E Albagha; Lon Cardon; Juliet E Compston; Cyrus Cooper; Emma Duncan; Richard Keen; Bente Langdahl; Alastair McLellan; Jeffrey O'Riordan; Huibert A Pols; David M Reid; Andre G Uitterlinden; John Wass; Simon T Bennett
Journal:  Hum Mol Genet       Date:  2005-03-03       Impact factor: 6.150

8.  Age, gender, and body mass effects on quantitative trait loci for bone mineral density: the Framingham Study.

Authors:  D Karasik; L A Cupples; M T Hannan; D P Kiel
Journal:  Bone       Date:  2003-09       Impact factor: 4.398

9.  First-stage autosomal genome screen in extended pedigrees suggests genes predisposing to low bone mineral density on chromosomes 1p, 2p and 4q.

Authors:  M Devoto; K Shimoya; J Caminis; J Ott; A Tenenhouse; M P Whyte; L Sereda; S Hall; E Considine; C J Williams; G Tromp; H Kuivaniemi; L Ala-Kokko; D J Prockop; L D Spotila
Journal:  Eur J Hum Genet       Date:  1998 Mar-Apr       Impact factor: 4.246

10.  Osteoblast-targeted expression of Sfrp4 in mice results in low bone mass.

Authors:  Rika Nakanishi; Haruhiko Akiyama; Hiroaki Kimura; Bungo Otsuki; Motoyuki Shimizu; Tadao Tsuboyama; Takashi Nakamura
Journal:  J Bone Miner Res       Date:  2008-02       Impact factor: 6.741

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  3 in total

1.  Integrating transcriptome-wide association study and mRNA expression profiling identifies novel genes associated with bone mineral density.

Authors:  M Ma; D-G Huang; X Liang; L Zhang; S Cheng; B Cheng; X Qi; P Li; Y Du; L Liu; Y Zhao; M Ding; Y Wen; X Guo; F Zhang
Journal:  Osteoporos Int       Date:  2019-04-15       Impact factor: 4.507

2.  Genetic variants affecting bone mineral density and bone mineral content at multiple skeletal sites in Hispanic children.

Authors:  Ruixue Hou; Shelley A Cole; Mariaelisa Graff; Karin Haack; Sandra Laston; Anthony G Comuzzie; Nitesh R Mehta; Kathleen Ryan; Diana L Cousminer; Babette S Zemel; Struan F A Grant; Braxton D Mitchell; Roman J Shypailo; Margaret L Gourlay; Kari E North; Nancy F Butte; V Saroja Voruganti
Journal:  Bone       Date:  2019-11-29       Impact factor: 4.398

3.  Association between vitamin D receptor gene polymorphisms (Fok1 and Bsm1) and osteoporosis: a systematic review.

Authors:  Zahra Mohammadi; Fateme Fayyazbakhsh; Mehdi Ebrahimi; Mahsa M Amoli; Patricia Khashayar; Mahboubeh Dini; Reza Nezam Zadeh; Abbasali Keshtkar; Hamid Reza Barikani
Journal:  J Diabetes Metab Disord       Date:  2014-10-17
  3 in total

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