Literature DB >> 15466007

A genome-wide linkage scan for bone mineral density in an extended sample: evidence for linkage on 11q23 and Xq27.

H Shen1, Y-Y Zhang, J-R Long, F-H Xu, Y-Z Liu, P Xiao, L-J Zhao, D-H Xiong, Y-J Liu, V Dvornyk, S Rocha-Sanchez, P-Y Liu, J-L Li, T Conway, K M Davies, R R Recker, H-W Deng.   

Abstract

BACKGROUND: Osteoporosis is a major public health problem, mainly quantified by low bone mineral density (BMD). The majority of BMD variation is determined by genetic effects. A pilot whole genome linkage scan (WGS) was previously reported in 53 white pedigrees with 630 subjects. Several genomic regions were suggested to be linked to BMD variation.
OBJECTIVE: To substantiate these previous findings and detect new genomic regions.
METHODS: A WGS was conducted on an extended sample where the size was almost tripled (1816 subjects from 79 pedigrees). All the subjects were genotyped with 451 microsatellite markers spaced approximately 8.1 cM apart across the human genome. Two point and multipoint linkage analyses were carried out using the variance component method.
RESULTS: The strongest linkage signal was obtained on Xq27 with two point LOD scores of 4.30 for wrist BMD, and 2.57 for hip BMD, respectively. Another important region was 11q23, which achieved a maximum LOD score of 3.13 for spine BMD in multipoint analyses, confirming the results on this region in two earlier independent studies. Suggestive linkage evidence was also found on 7p14 and 20p12.
CONCLUSIONS: Together with the findings from other studies, the current study has further delineated the genetic basis of bone mass and highlights the importance of increasing sample size to confirm linkage findings and to identify new regions of linkage.

Entities:  

Mesh:

Year:  2004        PMID: 15466007      PMCID: PMC1735607          DOI: 10.1136/jmg.2004.020396

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   6.318


  45 in total

1.  Problems in the definition, interpretation, and evaluation of genetic heterogeneity.

Authors:  A S Whittemore; J Halpern
Journal:  Am J Hum Genet       Date:  2001-01-19       Impact factor: 11.025

2.  Characterization of perimenopausal bone loss: a prospective study.

Authors:  R Recker; J Lappe; K Davies; R Heaney
Journal:  J Bone Miner Res       Date:  2000-10       Impact factor: 6.741

3.  The replication requirement.

Authors:  V J Vieland
Journal:  Nat Genet       Date:  2001-11       Impact factor: 38.330

4.  Is population bone mineral density variation linked to the marker D11S987 on chromosome 11q12-13?

Authors:  H W Deng; F H Xu; T Conway; X T Deng; J L Li; K M Davies; H Deng; M Johnson; R R Recker
Journal:  J Clin Endocrinol Metab       Date:  2001-08       Impact factor: 5.958

5.  Toward high-throughput genotyping: dynamic and automatic software for manipulating large-scale genotype data using fluorescently labeled dinucleotide markers.

Authors:  J L Li; H Deng; D B Lai; F Xu; J Chen; G Gao; R R Recker; H W Deng
Journal:  Genome Res       Date:  2001-07       Impact factor: 9.043

6.  Evidence on major gene control of cortical index in pedigree data from Middle Dalmatia, Croatia.

Authors:  E Ginsburg; T Skarić-Jurić; E Kobyliansky; D Karasik; I Malkin; P Rudan
Journal:  Am J Hum Biol       Date:  2001 May-Jun       Impact factor: 1.937

7.  Merlin--rapid analysis of dense genetic maps using sparse gene flow trees.

Authors:  Gonçalo R Abecasis; Stacey S Cherny; William O Cookson; Lon R Cardon
Journal:  Nat Genet       Date:  2001-12-03       Impact factor: 38.330

8.  Genome screening using extremely discordant and extremely concordant sib pairs.

Authors:  C Gu; A A Todorov; D C Rao
Journal:  Genet Epidemiol       Date:  1997       Impact factor: 2.135

9.  Genetic determination of Colles' fracture and differential bone mass in women with and without Colles' fracture.

Authors:  H W Deng; W M Chen; S Recker; M R Stegman; J L Li; K M Davies; Y Zhou; H Deng; R Heaney; R R Recker
Journal:  J Bone Miner Res       Date:  2000-07       Impact factor: 6.741

10.  Genetic variation in the gene encoding calpain-10 is associated with type 2 diabetes mellitus.

Authors:  Y Horikawa; N Oda; N J Cox; X Li; M Orho-Melander; M Hara; Y Hinokio; T H Lindner; H Mashima; P E Schwarz; L del Bosque-Plata; Y Horikawa; Y Oda; I Yoshiuchi; S Colilla; K S Polonsky; S Wei; P Concannon; N Iwasaki; J Schulze; L J Baier; C Bogardus; L Groop; E Boerwinkle; C L Hanis; G I Bell
Journal:  Nat Genet       Date:  2000-10       Impact factor: 38.330

View more
  21 in total

1.  Bone mineral density is linked to 1p36 and 7p15-13 in a southern Chinese population.

Authors:  Hoi Yee Gloria Li; Wai Chee Annie Kung; Qing Yang Huang
Journal:  J Bone Miner Metab       Date:  2010-07-06       Impact factor: 2.626

Review 2.  Molecular genetic studies of gene identification for osteoporosis: a 2004 update.

Authors:  Yong-Jun Liu; Hui Shen; Peng Xiao; Dong-Hai Xiong; Li-Hua Li; Robert R Recker; Hong-Wen Deng
Journal:  J Bone Miner Res       Date:  2006-10       Impact factor: 6.741

3.  Meta-analysis of genome-wide scans provides evidence for sex- and site-specific regulation of bone mass.

Authors:  John Pa Ioannidis; Mandy Y Ng; Pak C Sham; Elias Zintzaras; Cathryn M Lewis; Hong-Wen Deng; Michael J Econs; David Karasik; Marcella Devoto; Candace M Kammerer; Tim Spector; Toby Andrew; L Adrienne Cupples; Emma L Duncan; Tatiana Foroud; Douglas P Kiel; Daniel Koller; Bente Langdahl; Braxton D Mitchell; Munro Peacock; Robert Recker; Hui Shen; Katia Sol-Church; Loretta D Spotila; Andre G Uitterlinden; Scott G Wilson; Annie Wc Kung; Stuart H Ralston
Journal:  J Bone Miner Res       Date:  2007-02       Impact factor: 6.741

4.  A whole genome linkage scan for QTLs underlying peak bone mineral density.

Authors:  F Zhang; P Xiao; F Yang; H Shen; D-H Xiong; H-Y Deng; C J Papasian; B M Drees; J J Hamilton; R R Recker; H-W Deng
Journal:  Osteoporos Int       Date:  2007-09-19       Impact factor: 4.507

5.  Meta-analysis of genome-wide linkage studies for bone mineral density.

Authors:  Young Ho Lee; Young Hee Rho; Seong Jae Choi; Jong Dae Ji; Gwan Gyu Song
Journal:  J Hum Genet       Date:  2006-03-14       Impact factor: 3.172

6.  A genomewide scan for quantitative trait loci underlying areal bone size variation in 451 Caucasian families.

Authors:  H Shen; J-R Long; D-H Xiong; Y-F Guo; P Xiao; Y-Z Liu; L-J Zhao; Y-J Liu; H-Y Deng; J-L Li; R R Recker; H-W Deng
Journal:  J Med Genet       Date:  2006-07-06       Impact factor: 6.318

Review 7.  Choice of study phenotype in osteoporosis genetic research.

Authors:  Yuan Chen; Hui Shen; Fang Yang; Peng-Yuan Liu; Nelson Tang; Robert R Recker; Hong-Wen Deng
Journal:  J Bone Miner Metab       Date:  2009-02-03       Impact factor: 2.626

8.  SNP rs6265 regulates protein phosphorylation and osteoblast differentiation and influences BMD in humans.

Authors:  Fei-Yan Deng; Li-Jun Tan; Hui Shen; Yong-Jun Liu; Yao-Zhong Liu; Jian Li; Xue-Zhen Zhu; Xiang-Ding Chen; Qing Tian; Ming Zhao; Hong-Wen Deng
Journal:  J Bone Miner Res       Date:  2013-12       Impact factor: 6.741

9.  Genes influencing spinal bone mineral density in inbred F344, LEW, COP, and DA rats.

Authors:  Imranul Alam; Qiwei Sun; Daniel L Koller; Lixiang Liu; Yunlong Liu; Howard J Edenberg; Tatiana Foroud; Charles H Turner
Journal:  Funct Integr Genomics       Date:  2009-10-15       Impact factor: 3.410

10.  Vitamin D-binding protein gene microsatellite polymorphism influences BMD and risk of fractures in men.

Authors:  Z H Al-oanzi; S P Tuck; S S Mastana; G D Summers; D B Cook; R M Francis; H K Datta
Journal:  Osteoporos Int       Date:  2007-11-24       Impact factor: 4.507

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.