Literature DB >> 20603019

TIF1gamma controls erythroid cell fate by regulating transcription elongation.

Xiaoying Bai1, Jonghwan Kim, Zhongan Yang, Michael J Jurynec, Thomas E Akie, Joseph Lee, Jocelyn LeBlanc, Anna Sessa, Hong Jiang, Anthony DiBiase, Yi Zhou, David J Grunwald, Shuo Lin, Alan B Cantor, Stuart H Orkin, Leonard I Zon.   

Abstract

Recent genome-wide studies have demonstrated that pausing of RNA polymerase II (Pol II) occurred on many vertebrate genes. By genetic studies in the zebrafish tif1gamma mutant moonshine we found that loss of function of Pol II-associated factors PAF or DSIF rescued erythroid gene transcription in tif1gamma-deficient animals. Biochemical analysis established physical interactions among TIF1gamma, the blood-specific SCL transcription complex, and the positive elongation factors p-TEFb and FACT. Chromatin immunoprecipitation assays in human CD34(+) cells supported a TIF1gamma-dependent recruitment of positive elongation factors to erythroid genes to promote transcription elongation by counteracting Pol II pausing. Our study establishes a mechanism for regulating tissue cell fate and differentiation through transcription elongation. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20603019      PMCID: PMC3072682          DOI: 10.1016/j.cell.2010.05.028

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  51 in total

1.  The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p.

Authors:  Adam Wood; Jessica Schneider; Jim Dover; Mark Johnston; Ali Shilatifard
Journal:  J Biol Chem       Date:  2003-07-21       Impact factor: 5.157

Review 2.  Controlling the elongation phase of transcription with P-TEFb.

Authors:  B Matija Peterlin; David H Price
Journal:  Mol Cell       Date:  2006-08-04       Impact factor: 17.970

3.  The Spt4p subunit of yeast DSIF stimulates association of the Paf1 complex with elongating RNA polymerase II.

Authors:  Hongfang Qiu; Cuihua Hu; Chi-Ming Wong; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

4.  Properties of RNA polymerase II elongation complexes before and after the P-TEFb-mediated transition into productive elongation.

Authors:  Bo Cheng; David H Price
Journal:  J Biol Chem       Date:  2007-06-04       Impact factor: 5.157

5.  KAP-1, a novel corepressor for the highly conserved KRAB repression domain.

Authors:  J R Friedman; W J Fredericks; D E Jensen; D W Speicher; X P Huang; E G Neilson; F J Rauscher
Journal:  Genes Dev       Date:  1996-08-15       Impact factor: 11.361

6.  The Paf1 complex physically and functionally associates with transcription elongation factors in vivo.

Authors:  Sharon L Squazzo; Patrick J Costa; Derek L Lindstrom; Kathryn E Kumer; Rajna Simic; Jennifer L Jennings; Andrew J Link; Karen M Arndt; Grant A Hartzog
Journal:  EMBO J       Date:  2002-04-02       Impact factor: 11.598

7.  Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA.

Authors:  Yuki Yamaguchi; Naoto Inukai; Takashi Narita; Tadashi Wada; Hiroshi Handa
Journal:  Mol Cell Biol       Date:  2002-05       Impact factor: 4.272

8.  TIF1delta, a novel HP1-interacting member of the transcriptional intermediary factor 1 (TIF1) family expressed by elongating spermatids.

Authors:  Konstantin Khetchoumian; Marius Teletin; Manuel Mark; Thierry Lerouge; Margarita Cerviño; Mustapha Oulad-Abdelghani; Pierre Chambon; Régine Losson
Journal:  J Biol Chem       Date:  2004-08-20       Impact factor: 5.157

9.  An extended transcriptional network for pluripotency of embryonic stem cells.

Authors:  Jonghwan Kim; Jianlin Chu; Xiaohua Shen; Jianlong Wang; Stuart H Orkin
Journal:  Cell       Date:  2008-03-21       Impact factor: 41.582

10.  Novel binding partners of Ldb1 are required for haematopoietic development.

Authors:  Natalia Meier; Sanja Krpic; Patrick Rodriguez; John Strouboulis; Maria Monti; Jeroen Krijgsveld; Martin Gering; Roger Patient; Arnd Hostert; Frank Grosveld
Journal:  Development       Date:  2006-11-15       Impact factor: 6.868

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  107 in total

Review 1.  RNA polymerase II elongation control.

Authors:  Qiang Zhou; Tiandao Li; David H Price
Journal:  Annu Rev Biochem       Date:  2012-03-09       Impact factor: 23.643

2.  Stringent analysis of gene function and protein-protein interactions using fluorescently tagged genes.

Authors:  Ralph A Neumüller; Frederik Wirtz-Peitz; Stella Lee; Young Kwon; Michael Buckner; Roger A Hoskins; Koen J T Venken; Hugo J Bellen; Stephanie E Mohr; Norbert Perrimon
Journal:  Genetics       Date:  2011-12-14       Impact factor: 4.562

3.  Adenovirus E4-ORF3-dependent relocalization of TIF1α and TIF1γ relies on access to the Coiled-Coil motif.

Authors:  Elizabeth I Vink; Mark A Yondola; Kai Wu; Patrick Hearing
Journal:  Virology       Date:  2011-11-27       Impact factor: 3.616

Review 4.  From stem cell to red cell: regulation of erythropoiesis at multiple levels by multiple proteins, RNAs, and chromatin modifications.

Authors:  Shilpa M Hattangadi; Piu Wong; Lingbo Zhang; Johan Flygare; Harvey F Lodish
Journal:  Blood       Date:  2011-10-12       Impact factor: 22.113

5.  Moonshine illuminates a developmental role for regulated transcription elongation.

Authors:  Daniel A Gilchrist; Karen Adelman
Journal:  Dev Cell       Date:  2010-07-20       Impact factor: 12.270

6.  Loss of TRIM33 causes resistance to BET bromodomain inhibitors through MYC- and TGF-β-dependent mechanisms.

Authors:  Xiarong Shi; Valia T Mihaylova; Leena Kuruvilla; Fang Chen; Stephen Viviano; Massimiliano Baldassarre; David Sperandio; Ruben Martinez; Peng Yue; Jamie G Bates; David G Breckenridge; Joseph Schlessinger; Benjamin E Turk; David A Calderwood
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-18       Impact factor: 11.205

Review 7.  Transcriptional elongation checkpoint control in development and disease.

Authors:  Edwin Smith; Ali Shilatifard
Journal:  Genes Dev       Date:  2013-05-15       Impact factor: 11.361

8.  Dynamic Change of Transcription Pausing through Modulating NELF Protein Stability Regulates Granulocytic Differentiation.

Authors:  Xiuli Liu; Aishwarya A Gogate; Melodi Tastemel; Venkat S Malladi; Huiyu Yao; Kim Nguyen; Lily Jun-Shen Huang; Xiaoying Bai
Journal:  Blood Adv       Date:  2017-08-08

Review 9.  Oceans of opportunity: exploring vertebrate hematopoiesis in zebrafish.

Authors:  Kelli J Carroll; Trista E North
Journal:  Exp Hematol       Date:  2014-05-09       Impact factor: 3.084

Review 10.  Transcriptional regulation and its misregulation in disease.

Authors:  Tong Ihn Lee; Richard A Young
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

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