Literature DB >> 20600922

All y'all need to know 'bout retroelements in cancer.

Victoria P Belancio1, Astrid M Roy-Engel, Prescott L Deininger.   

Abstract

Genetic instability is one of the principal hallmarks and causative factors in cancer. Human transposable elements (TE) have been reported to cause human diseases, including several types of cancer through insertional mutagenesis of genes critical for preventing or driving malignant transformation. In addition to retrotransposition-associated mutagenesis, TEs have been found to contribute even more genomic rearrangements through non-allelic homologous recombination. TEs also have the potential to generate a wide range of mutations derivation of which is difficult to directly trace to mobile elements, including double strand breaks that may trigger mutagenic genomic rearrangements. Genome-wide hypomethylation of TE promoters and significantly elevated TE expression in almost all human cancers often accompanied by the loss of critical DNA sensing and repair pathways suggests that the negative impact of mobile elements on genome stability should increase as human tumors evolve. The biological consequences of elevated retroelement expression, such as the rate of their amplification, in human cancers remain obscure, particularly, how this increase translates into disease-relevant mutations. This review is focused on the cellular mechanisms that control human TE-associated mutagenesis in cancer and summarizes the current understanding of TE contribution to genetic instability in human malignancies.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20600922      PMCID: PMC2943028          DOI: 10.1016/j.semcancer.2010.06.001

Source DB:  PubMed          Journal:  Semin Cancer Biol        ISSN: 1044-579X            Impact factor:   15.707


  159 in total

1.  Hypomethylation of the retrotransposon LINE-1 in malignancy.

Authors:  Y Tsutsumi
Journal:  Jpn J Clin Oncol       Date:  2000-07       Impact factor: 3.019

2.  Alu-containing exons are alternatively spliced.

Authors:  Rotem Sorek; Gil Ast; Dan Graur
Journal:  Genome Res       Date:  2002-07       Impact factor: 9.043

3.  SVA elements: a hominid-specific retroposon family.

Authors:  Hui Wang; Jinchuan Xing; Deepak Grover; Dale J Hedges; Kyudong Han; Jerilyn A Walker; Mark A Batzer
Journal:  J Mol Biol       Date:  2005-10-19       Impact factor: 5.469

Review 4.  Epigenetic therapy of cancer: past, present and future.

Authors:  Christine B Yoo; Peter A Jones
Journal:  Nat Rev Drug Discov       Date:  2006-01       Impact factor: 84.694

5.  Methylation and deamination of CpGs generate p53-binding sites on a genomic scale.

Authors:  Tomasz Zemojtel; Szymon M Kielbasa; Peter F Arndt; Ho-Ryun Chung; Martin Vingron
Journal:  Trends Genet       Date:  2008-12-26       Impact factor: 11.639

6.  Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition.

Authors:  Q Feng; J V Moran; H H Kazazian; J D Boeke
Journal:  Cell       Date:  1996-11-29       Impact factor: 41.582

7.  Human L1 element target-primed reverse transcription in vitro.

Authors:  Gregory J Cost; Qinghua Feng; Alain Jacquier; Jef D Boeke
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

8.  Melanoma loss-of-function mutants in Xiphophorus caused by Xmrk-oncogene deletion and gene disruption by a transposable element.

Authors:  M Schartl; U Hornung; H Gutbrod; J N Volff; J Wittbrodt
Journal:  Genetics       Date:  1999-11       Impact factor: 4.562

9.  DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes.

Authors:  Satomi Kuramochi-Miyagawa; Toshiaki Watanabe; Kengo Gotoh; Yasushi Totoki; Atsushi Toyoda; Masahito Ikawa; Noriko Asada; Kanako Kojima; Yuka Yamaguchi; Takashi W Ijiri; Kenichiro Hata; En Li; Yoichi Matsuda; Tohru Kimura; Masaru Okabe; Yoshiyuki Sakaki; Hiroyuki Sasaki; Toru Nakano
Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

10.  LINE-1 ORF1 protein enhances Alu SINE retrotransposition.

Authors:  Nicholas Wallace; Bradley J Wagstaff; Prescott L Deininger; Astrid M Roy-Engel
Journal:  Gene       Date:  2008-04-24       Impact factor: 3.688

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  92 in total

1.  Alu element-containing RNAs maintain nucleolar structure and function.

Authors:  Maïwen Caudron-Herger; Teresa Pankert; Jeanette Seiler; Attila Németh; Renate Voit; Ingrid Grummt; Karsten Rippe
Journal:  EMBO J       Date:  2015-10-13       Impact factor: 11.598

Review 2.  Melatonin: an inhibitor of breast cancer.

Authors:  Steven M Hill; Victoria P Belancio; Robert T Dauchy; Shulin Xiang; Samantha Brimer; Lulu Mao; Adam Hauch; Peter W Lundberg; Whitney Summers; Lin Yuan; Tripp Frasch; David E Blask
Journal:  Endocr Relat Cancer       Date:  2015-04-15       Impact factor: 5.678

3.  SQuIRE reveals locus-specific regulation of interspersed repeat expression.

Authors:  Wan R Yang; Daniel Ardeljan; Clarissa N Pacyna; Lindsay M Payer; Kathleen H Burns
Journal:  Nucleic Acids Res       Date:  2019-03-18       Impact factor: 16.971

Review 4.  Retrotransposons as regulators of gene expression.

Authors:  Reyad A Elbarbary; Bronwyn A Lucas; Lynne E Maquat
Journal:  Science       Date:  2016-02-11       Impact factor: 47.728

Review 5.  Emerging connections between RNA and autophagy.

Authors:  Lisa B Frankel; Michal Lubas; Anders H Lund
Journal:  Autophagy       Date:  2016-10-07       Impact factor: 16.016

6.  Chimeras Linked to Tandem Repeats and Transposable Elements in Tetraploid Hybrid Fish.

Authors:  Lihai Ye; Ni Jiao; Xiaojun Tang; Yiyi Chen; Xiaolan Ye; Li Ren; Fangzhou Hu; Shi Wang; Ming Wen; Chun Zhang; Min Tao; Shaojun Liu
Journal:  Mar Biotechnol (NY)       Date:  2017-07-05       Impact factor: 3.619

Review 7.  Silencing of endogenous retroviruses by heterochromatin.

Authors:  Sophia Groh; Gunnar Schotta
Journal:  Cell Mol Life Sci       Date:  2017-02-03       Impact factor: 9.261

8.  Retrotransposons and genetic instability in hepatocellular carcinoma.

Authors:  Ruchi Shukla
Journal:  Hepat Oncol       Date:  2017-07-18

Review 9.  Transposons, p53 and Genome Security.

Authors:  Bhavana Tiwari; Amanda E Jones; John M Abrams
Journal:  Trends Genet       Date:  2018-09-05       Impact factor: 11.639

Review 10.  Regulation of Single-Strand Annealing and its Role in Genome Maintenance.

Authors:  Ragini Bhargava; David O Onyango; Jeremy M Stark
Journal:  Trends Genet       Date:  2016-07-19       Impact factor: 11.639

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