Literature DB >> 20595229

MicroRNAs and gene regulatory networks: managing the impact of noise in biological systems.

Héctor Herranz1, Stephen M Cohen.   

Abstract

Biological systems are continuously challenged by an environment that is variable. Yet, a key feature of developmental and physiological processes is their remarkable stability. This review considers how microRNAs contribute to gene regulatory networks that confer robustness.

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Year:  2010        PMID: 20595229      PMCID: PMC2895193          DOI: 10.1101/gad.1937010

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  36 in total

Review 1.  Molecular mechanisms of developmental timing in C. elegans and Drosophila.

Authors:  C S Thummel
Journal:  Dev Cell       Date:  2001-10       Impact factor: 12.270

2.  Senseless acts as a binary switch during sensory organ precursor selection.

Authors:  Hamed Jafar-Nejad; Melih Acar; Riitta Nolo; Haluk Lacin; Hongling Pan; Susan M Parkhurst; Hugo J Bellen
Journal:  Genes Dev       Date:  2003-12-01       Impact factor: 11.361

3.  Network motifs: simple building blocks of complex networks.

Authors:  R Milo; S Shen-Orr; S Itzkovitz; N Kashtan; D Chklovskii; U Alon
Journal:  Science       Date:  2002-10-25       Impact factor: 47.728

Review 4.  Architecture of a microRNA-controlled gene regulatory network that diversifies neuronal cell fates.

Authors:  O Hobert
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2006

5.  A microRNA imparts robustness against environmental fluctuation during development.

Authors:  Xin Li; Justin J Cassidy; Catherine A Reinke; Stephen Fischboeck; Richard W Carthew
Journal:  Cell       Date:  2009-04-17       Impact factor: 41.582

6.  An epigenetic switch involving NF-kappaB, Lin28, Let-7 MicroRNA, and IL6 links inflammation to cell transformation.

Authors:  Dimitrios Iliopoulos; Heather A Hirsch; Kevin Struhl
Journal:  Cell       Date:  2009-10-29       Impact factor: 41.582

7.  Senseless, a Zn finger transcription factor, is necessary and sufficient for sensory organ development in Drosophila.

Authors:  R Nolo; L A Abbott; H J Bellen
Journal:  Cell       Date:  2000-08-04       Impact factor: 41.582

8.  Suppression of Myc-induced apoptosis in beta cells exposes multiple oncogenic properties of Myc and triggers carcinogenic progression.

Authors:  Stella Pelengaris; Michael Khan; Gerard I Evan
Journal:  Cell       Date:  2002-05-03       Impact factor: 41.582

9.  Ephrin-B1 reverse signaling controls a posttranscriptional feedback mechanism via miR-124.

Authors:  Dina N Arvanitis; Thomas Jungas; Annie Behar; Alice Davy
Journal:  Mol Cell Biol       Date:  2010-03-22       Impact factor: 4.272

10.  Transcriptional regulatory networks in Saccharomyces cerevisiae.

Authors:  Tong Ihn Lee; Nicola J Rinaldi; François Robert; Duncan T Odom; Ziv Bar-Joseph; Georg K Gerber; Nancy M Hannett; Christopher T Harbison; Craig M Thompson; Itamar Simon; Julia Zeitlinger; Ezra G Jennings; Heather L Murray; D Benjamin Gordon; Bing Ren; John J Wyrick; Jean-Bosco Tagne; Thomas L Volkert; Ernest Fraenkel; David K Gifford; Richard A Young
Journal:  Science       Date:  2002-10-25       Impact factor: 47.728

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  183 in total

1.  CFTR mediates bicarbonate-dependent activation of miR-125b in preimplantation embryo development.

Authors:  Yong Chao Lu; Hui Chen; Kin Lam Fok; Lai Ling Tsang; Mei Kuen Yu; Xiao Hu Zhang; Jing Chen; Xiaohua Jiang; Yiu Wa Chung; Alvin Chun Hang Ma; Anskar Yu Hung Leung; He Feng Huang; Hsiao Chang Chan
Journal:  Cell Res       Date:  2012-06-05       Impact factor: 25.617

2.  miR-285-Yki/Mask double-negative feedback loop mediates blood-brain barrier integrity in Drosophila.

Authors:  Dong Li; Yanling Liu; Chunli Pei; Peng Zhang; Linqing Pan; Jing Xiao; Songshu Meng; Zengqiang Yuan; Xiaolin Bi
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-06       Impact factor: 11.205

Review 3.  Aberrant epigenetic grooming of miRNAs in pancreatic cancer: a systems biology perspective.

Authors:  Asfar S Azmi; Frances W J Beck; Bin Bao; Ramzi M Mohammad; Fazlul H Sarkar
Journal:  Epigenomics       Date:  2011-12       Impact factor: 4.778

Review 4.  Evolution of microRNA diversity and regulation in animals.

Authors:  Eugene Berezikov
Journal:  Nat Rev Genet       Date:  2011-11-18       Impact factor: 53.242

5.  A crossroad of microRNAs and immediate early genes (IEGs) encoding oncogenic transcription factors in breast cancer.

Authors:  Aldema Sas-Chen; Roi Avraham; Yosef Yarden
Journal:  J Mammary Gland Biol Neoplasia       Date:  2012-02-12       Impact factor: 2.673

Review 6.  Cellular origin(s) of chronic lymphocytic leukemia: cautionary notes and additional considerations and possibilities.

Authors:  Nicholas Chiorazzi; Manlio Ferrarini
Journal:  Blood       Date:  2010-12-09       Impact factor: 22.113

7.  miR-191 regulates mouse erythroblast enucleation by down-regulating Riok3 and Mxi1.

Authors:  Lingbo Zhang; Johan Flygare; Piu Wong; Bing Lim; Harvey F Lodish
Journal:  Genes Dev       Date:  2010-12-31       Impact factor: 11.361

8.  Quantifying negative feedback regulation by micro-RNAs.

Authors:  Shangying Wang; Sridhar Raghavachari
Journal:  Phys Biol       Date:  2011-08-10       Impact factor: 2.583

9.  Gene regulation and noise reduction by coupling of stochastic processes.

Authors:  Alexandre F Ramos; José Eduardo M Hornos; John Reinitz
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-02-26

Review 10.  The biological functions of miRNAs: lessons from in vivo studies.

Authors:  Joana A Vidigal; Andrea Ventura
Journal:  Trends Cell Biol       Date:  2014-12-04       Impact factor: 20.808

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