Literature DB >> 22126293

Aberrant epigenetic grooming of miRNAs in pancreatic cancer: a systems biology perspective.

Asfar S Azmi1, Frances W J Beck, Bin Bao, Ramzi M Mohammad, Fazlul H Sarkar.   

Abstract

Pancreatic cancer (PC) is a complex disease harboring a myriad of genetic and epigenetic changes. The dismal survival of patients diagnosed with PC is in part due to de novo and acquired resistance to conventional therapeutics, resulting from deregulated signaling including aberrant expression of small nc miRNAs. Emerging research in this area has lead to the identification and characterization of deregulated miRNAs, which have generated a renewed interest and hope in that novel targeting of miRNAs may lead to a better clinical outcome for patients diagnosed with PC. However, recent evidence suggests that miRNAs are also under a highly coordinated system of epigenetic regulation emphasizing the fact that the design of miRNAs as targeted therapy may not be as simple as originally anticipated. For a successful miRNA-based therapeutic regimen, a holistic integrated approach may be required to take into account because of these emerging epigenetic regulatory mechanisms. In this article, we will discuss miRNA epigenetics, it's significance in PC and the use of a systems science to identify these aberrant epigenetically groomed miRNAs, and we believe that such knowledge would likely benefit further research to realize the dream of miRNA-based targeted therapy for human malignancies.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22126293      PMCID: PMC3243906          DOI: 10.2217/epi.11.97

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  81 in total

Review 1.  The evolution of gene regulation by transcription factors and microRNAs.

Authors:  Kevin Chen; Nikolaus Rajewsky
Journal:  Nat Rev Genet       Date:  2007-02       Impact factor: 53.242

2.  Integration of biological networks and gene expression data using Cytoscape.

Authors:  Melissa S Cline; Michael Smoot; Ethan Cerami; Allan Kuchinsky; Nerius Landys; Chris Workman; Rowan Christmas; Iliana Avila-Campilo; Michael Creech; Benjamin Gross; Kristina Hanspers; Ruth Isserlin; Ryan Kelley; Sarah Killcoyne; Samad Lotia; Steven Maere; John Morris; Keiichiro Ono; Vuk Pavlovic; Alexander R Pico; Aditya Vailaya; Peng-Liang Wang; Annette Adler; Bruce R Conklin; Leroy Hood; Martin Kuiper; Chris Sander; Ilya Schmulevich; Benno Schwikowski; Guy J Warner; Trey Ideker; Gary D Bader
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

3.  The silencing of microRNA 148a production by DNA hypermethylation is an early event in pancreatic carcinogenesis.

Authors:  Naïma Hanoun; Yannick Delpu; Arief A Suriawinata; Barbara Bournet; Christophe Bureau; Janick Selves; Gregory J Tsongalis; Marlène Dufresne; Louis Buscail; Pierre Cordelier; Jérôme Torrisani
Journal:  Clin Chem       Date:  2010-04-29       Impact factor: 8.327

4.  Gemcitabine sensitivity can be induced in pancreatic cancer cells through modulation of miR-200 and miR-21 expression by curcumin or its analogue CDF.

Authors:  Shadan Ali; Aamir Ahmad; Sanjeev Banerjee; Subhash Padhye; Kristin Dominiak; Jacqueline M Schaffert; Zhiwei Wang; Philip A Philip; Fazlul H Sarkar
Journal:  Cancer Res       Date:  2010-04-13       Impact factor: 12.701

5.  Downregulation of miR-132 by promoter methylation contributes to pancreatic cancer development.

Authors:  Shuyu Zhang; Jun Hao; Fang Xie; Xiangui Hu; Cong Liu; Jian Tong; Jundong Zhou; Jinchang Wu; Chenghao Shao
Journal:  Carcinogenesis       Date:  2011-06-10       Impact factor: 4.944

Review 6.  Cell signaling pathways altered by natural chemopreventive agents.

Authors:  Fazlul H Sarkar; Yiwei Li
Journal:  Mutat Res       Date:  2004-11-02       Impact factor: 2.433

7.  Up-regulation of miR-200 and let-7 by natural agents leads to the reversal of epithelial-to-mesenchymal transition in gemcitabine-resistant pancreatic cancer cells.

Authors:  Yiwei Li; Timothy G VandenBoom; Dejuan Kong; Zhiwei Wang; Shadan Ali; Philip A Philip; Fazlul H Sarkar
Journal:  Cancer Res       Date:  2009-08-04       Impact factor: 12.701

8.  Opposing regulatory roles of E2F in human telomerase reverse transcriptase (hTERT) gene expression in human tumor and normal somatic cells.

Authors:  Jaejoon Won; Jeongbin Yim; Tae Kook Kim
Journal:  FASEB J       Date:  2002-10-04       Impact factor: 5.191

9.  Features of mammalian microRNA promoters emerge from polymerase II chromatin immunoprecipitation data.

Authors:  David L Corcoran; Kusum V Pandit; Ben Gordon; Arindam Bhattacharjee; Naftali Kaminski; Panayiotis V Benos
Journal:  PLoS One       Date:  2009-04-23       Impact factor: 3.240

10.  MIPS: analysis and annotation of genome information in 2007.

Authors:  H W Mewes; S Dietmann; D Frishman; R Gregory; G Mannhaupt; K F X Mayer; M Münsterkötter; A Ruepp; M Spannagl; V Stümpflen; T Rattei
Journal:  Nucleic Acids Res       Date:  2007-12-23       Impact factor: 16.971

View more
  6 in total

Review 1.  Nuclear export mediated regulation of microRNAs: potential target for drug intervention.

Authors:  Irfana Muqbil; Bin Bao; Abdul Badi Abou-Samra; Ramzi M Mohammad; Asfar S Azmi
Journal:  Curr Drug Targets       Date:  2013-09       Impact factor: 3.465

2.  Identifying Biomarkers and Drug Targets Using Systems Biology Approaches for Pancreatic Cancer.

Authors:  Yi Tan; Lucio Miele; Fazlul H Sarkar; Zhiwei Wang
Journal:  Pancreat Disord Ther       Date:  2012-12-06

Review 3.  NO and Pancreatic Cancer: A Complex Interaction with Therapeutic Potential.

Authors:  Jian Wang; S Perwez Hussain
Journal:  Antioxid Redox Signal       Date:  2016-09-22       Impact factor: 8.401

Review 4.  MicroRNA expression and its implications for diagnosis and therapy of gallbladder cancer.

Authors:  Zheng Li; Xin Yu; Jianxiong Shen; Priscilla T Y Law; Matthew T V Chan; William K K Wu
Journal:  Oncotarget       Date:  2015-06-10

5.  Longitudinal evaluation of whole blood miRNA expression in firefighters.

Authors:  Alesia M Jung; Jin Zhou; Shawn C Beitel; Sally R Littau; John J Gulotta; Darin D Wallentine; Paul K Moore; Jefferey L Burgess
Journal:  J Expo Sci Environ Epidemiol       Date:  2021-02-18       Impact factor: 5.563

Review 6.  Regulation of microRNAs by epigenetics and their interplay involved in cancer.

Authors:  Xiaolan Liu; Xiaoyan Chen; Xinfang Yu; Yongguang Tao; Ann M Bode; Zigang Dong; Ya Cao
Journal:  J Exp Clin Cancer Res       Date:  2013-11-22
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.