Literature DB >> 20591991

Higher-order genome organization in human disease.

Tom Misteli1.   

Abstract

Genomes are organized into complex higher-order structures by folding of the DNA into chromatin fibers, chromosome domains, and ultimately chromosomes. The higher-order organization of genomes is functionally important for gene regulation and control of gene expression programs. Defects in how chromatin is globally organized are relevant for physiological and pathological processes. Mutations and transcriptional misregulation of several global genome organizers are linked to human diseases and global alterations in chromatin structure are emerging as key players in maintenance of genome stability, aging, and the formation of cancer translocations.

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Year:  2010        PMID: 20591991      PMCID: PMC2908770          DOI: 10.1101/cshperspect.a000794

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  102 in total

1.  A tissue-specific MAR/SAR DNA-binding protein with unusual binding site recognition.

Authors:  L A Dickinson; T Joh; Y Kohwi; T Kohwi-Shigematsu
Journal:  Cell       Date:  1992-08-21       Impact factor: 41.582

2.  Localisation and distance between ABL and BCR genes in interphase nuclei of bone marrow cells of control donors and patients with chronic myeloid leukaemia.

Authors:  E Lukásová; S Kozubek; M Kozubek; J Kjeronská; L Rýznar; J Horáková; E Krahulcová; G Horneck
Journal:  Hum Genet       Date:  1997-10       Impact factor: 4.132

Review 3.  Chromosome territories--a functional nuclear landscape.

Authors:  Thomas Cremer; Marion Cremer; Steffen Dietzel; Stefan Müller; Irina Solovei; Stanislav Fakan
Journal:  Curr Opin Cell Biol       Date:  2006-05-09       Impact factor: 8.382

4.  Histone H1 depletion in mammals alters global chromatin structure but causes specific changes in gene regulation.

Authors:  Yuhong Fan; Tatiana Nikitina; Jie Zhao; Tomara J Fleury; Riddhi Bhattacharyya; Eric E Bouhassira; Arnold Stein; Christopher L Woodcock; Arthur I Skoultchi
Journal:  Cell       Date:  2005-12-29       Impact factor: 41.582

5.  In situ visualization of DNA double-strand break repair in human fibroblasts.

Authors:  B E Nelms; R S Maser; J F MacKay; M G Lagally; J H Petrini
Journal:  Science       Date:  1998-04-24       Impact factor: 47.728

6.  Extrachromosomal rDNA circles--a cause of aging in yeast.

Authors:  D A Sinclair; L Guarente
Journal:  Cell       Date:  1997-12-26       Impact factor: 41.582

7.  Lamin A-dependent nuclear defects in human aging.

Authors:  Paola Scaffidi; Tom Misteli
Journal:  Science       Date:  2006-04-27       Impact factor: 47.728

8.  Mouse satellite DNA is transcribed in senescent cardiac muscle.

Authors:  J W Gaubatz; R G Cutler
Journal:  J Biol Chem       Date:  1990-10-15       Impact factor: 5.157

9.  CTCF mediates interchromosomal colocalization between Igf2/H19 and Wsb1/Nf1.

Authors:  Jian Qun Ling; Tao Li; Ji Fan Hu; Thanh H Vu; Hui Ling Chen; Xin Wen Qiu; Athena M Cherry; Andrew R Hoffman
Journal:  Science       Date:  2006-04-14       Impact factor: 47.728

10.  Changes in chromatin structure and mobility in living cells at sites of DNA double-strand breaks.

Authors:  Michael J Kruhlak; Arkady Celeste; Graham Dellaire; Oscar Fernandez-Capetillo; Waltraud G Müller; James G McNally; David P Bazett-Jones; André Nussenzweig
Journal:  J Cell Biol       Date:  2006-03-06       Impact factor: 10.539

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  109 in total

1.  Hox in space: gene cluster regulation linked to folding of chromatin.

Authors:  Alexey V Pindyurin; Bas van Steensel
Journal:  Nucleus       Date:  2012-03-01       Impact factor: 4.197

Review 2.  DNA methylation topology: potential of a chromatin landmark for epigenetic drug toxicology.

Authors:  Jian Tajbakhsh
Journal:  Epigenomics       Date:  2011-12       Impact factor: 4.778

Review 3.  Dicing bodies.

Authors:  Qi Liu; Leilei Shi; Yuda Fang
Journal:  Plant Physiol       Date:  2011-10-24       Impact factor: 8.340

4.  The epigenome and top-down causation.

Authors:  P C W Davies
Journal:  Interface Focus       Date:  2011-09-14       Impact factor: 3.906

5.  Twenty-four chromosome FISH in human IVF embryos reveals patterns of post-zygotic chromosome segregation and nuclear organisation.

Authors:  D Ioannou; K G L Fonseka; E J Meershoek; A R Thornhill; A Abogrein; M Ellis; D K Griffin
Journal:  Chromosome Res       Date:  2012-06-29       Impact factor: 5.239

Review 6.  Genome organizing function of SATB1 in tumor progression.

Authors:  Terumi Kohwi-Shigematsu; Krzysztof Poterlowicz; Ellen Ordinario; Hye-Jung Han; Vladimir A Botchkarev; Yoshinori Kohwi
Journal:  Semin Cancer Biol       Date:  2012-07-04       Impact factor: 15.707

Review 7.  Long-Range Chromatin Interactions.

Authors:  Job Dekker; Tom Misteli
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-10-01       Impact factor: 10.005

8.  Reconstruction of explicit structural properties at the nanoscale via spectroscopic microscopy.

Authors:  Lusik Cherkezyan; Di Zhang; Hariharan Subramanian; Allen Taflove; Vadim Backman
Journal:  J Biomed Opt       Date:  2016-02       Impact factor: 3.170

9.  CPF Recruitment to Non-canonical Transcription Termination Sites Triggers Heterochromatin Assembly and Gene Silencing.

Authors:  Tommy V Vo; Jothy Dhakshnamoorthy; Madeline Larkin; Martin Zofall; Gobi Thillainadesan; Vanivilasini Balachandran; Sahana Holla; David Wheeler; Shiv I S Grewal
Journal:  Cell Rep       Date:  2019-07-02       Impact factor: 9.423

Review 10.  The cellular etiology of chromosome translocations.

Authors:  Vassilis Roukos; Bharat Burman; Tom Misteli
Journal:  Curr Opin Cell Biol       Date:  2013-03-14       Impact factor: 8.382

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