Literature DB >> 16377562

Histone H1 depletion in mammals alters global chromatin structure but causes specific changes in gene regulation.

Yuhong Fan1, Tatiana Nikitina, Jie Zhao, Tomara J Fleury, Riddhi Bhattacharyya, Eric E Bouhassira, Arnold Stein, Christopher L Woodcock, Arthur I Skoultchi.   

Abstract

Linker histone H1 plays an important role in chromatin folding in vitro. To study the role of H1 in vivo, mouse embryonic stem cells null for three H1 genes were derived and were found to have 50% of the normal level of H1. H1 depletion caused dramatic chromatin structure changes, including decreased global nucleosome spacing, reduced local chromatin compaction, and decreases in certain core histone modifications. Surprisingly, however, microarray analysis revealed that expression of only a small number of genes is affected. Many of the affected genes are imprinted or are on the X chromosome and are therefore normally regulated by DNA methylation. Although global DNA methylation is not changed, methylation of specific CpGs within the regulatory regions of some of the H1 regulated genes is reduced. These results indicate that linker histones can participate in epigenetic regulation of gene expression by contributing to the maintenance or establishment of specific DNA methylation patterns.

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Year:  2005        PMID: 16377562     DOI: 10.1016/j.cell.2005.10.028

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  275 in total

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Journal:  Genes Dev       Date:  2012-03-30       Impact factor: 11.361

4.  DNA methylation: superior or subordinate in the epigenetic hierarchy?

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Journal:  Genes Cancer       Date:  2011-06

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7.  Chromatin condensing functions of the linker histone C-terminal domain are mediated by specific amino acid composition and intrinsic protein disorder.

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Journal:  Biochemistry       Date:  2009-01-13       Impact factor: 3.162

Review 8.  Role of chromatin states in transcriptional memory.

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Journal:  Biochim Biophys Acta       Date:  2009-02-21

Review 9.  The dynamics of HMG protein-chromatin interactions in living cells.

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Journal:  Biochem Cell Biol       Date:  2009-02       Impact factor: 3.626

10.  Mutations in linker histone genes HIST1H1 B, C, D, and E; OCT2 (POU2F2); IRF8; and ARID1A underlying the pathogenesis of follicular lymphoma.

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Journal:  Blood       Date:  2014-01-16       Impact factor: 22.113

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