Literature DB >> 20583820

Ionic memcapacitive effects in nanopores.

Matt Krems1, Yuriy V Pershin, Massimiliano Di Ventra.   

Abstract

Using molecular dynamics simulations, we show that, when subject to a periodic external electric field, a nanopore in ionic solution acts as a capacitor with memory (memcapacitor) at various frequencies and strengths of the electric field. Most importantly, the hysteresis loop of this memcapacitor shows both negative and diverging capacitance as a function of the voltage. The origin of this effect stems from the slow polarizability of the ionic solution due to the finite mobility of ions in water. We develop a microscopic quantitative model which captures the main features we observe in the simulations and suggest experimental tests of our predictions. We also suggest a possible memory mechanism due to the transport of ions through the nanopore itself, which may be observed at small frequencies. These effects may be important both in DNA sequencing proposals using nanopores and possibly in the dynamics of action potentials in neurons.

Entities:  

Year:  2010        PMID: 20583820      PMCID: PMC2921191          DOI: 10.1021/nl1014734

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  9 in total

1.  Microscopic Kinetics of DNA Translocation through synthetic nanopores.

Authors:  Aleksij Aksimentiev; Jiunn B Heng; Gregory Timp; Klaus Schulten
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

2.  Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map.

Authors:  Aleksij Aksimentiev; Klaus Schulten
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

3.  Scalable molecular dynamics with NAMD.

Authors:  James C Phillips; Rosemary Braun; Wei Wang; James Gumbart; Emad Tajkhorshid; Elizabeth Villa; Christophe Chipot; Robert D Skeel; Laxmikant Kalé; Klaus Schulten
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

4.  Fast DNA sequencing via transverse electronic transport.

Authors:  Johan Lagerqvist; Michael Zwolak; Massimiliano Di Ventra
Journal:  Nano Lett       Date:  2006-04       Impact factor: 11.189

5.  Detection of DNA sequences using an alternating electric field in a nanopore capacitor.

Authors:  Grigori Sigalov; Jeffrey Comer; Gregory Timp; Aleksei Aksimentiev
Journal:  Nano Lett       Date:  2007-12-11       Impact factor: 11.189

6.  Influence of the environment and probes on rapid DNA sequencing via transverse electronic transport.

Authors:  Johan Lagerqvist; Michael Zwolak; Massimiliano Di Ventra
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

7.  Effect of noise on DNA sequencing via transverse electronic transport.

Authors:  Matt Krems; Michael Zwolak; Yuriy V Pershin; Massimiliano Di Ventra
Journal:  Biophys J       Date:  2009-10-07       Impact factor: 4.033

Review 8.  The potential and challenges of nanopore sequencing.

Authors:  Daniel Branton; David W Deamer; Andre Marziali; Hagan Bayley; Steven A Benner; Thomas Butler; Massimiliano Di Ventra; Slaven Garaj; Andrew Hibbs; Xiaohua Huang; Stevan B Jovanovich; Predrag S Krstic; Stuart Lindsay; Xinsheng Sean Ling; Carlos H Mastrangelo; Amit Meller; John S Oliver; Yuriy V Pershin; J Michael Ramsey; Robert Riehn; Gautam V Soni; Vincent Tabard-Cossa; Meni Wanunu; Matthew Wiggin; Jeffery A Schloss
Journal:  Nat Biotechnol       Date:  2008-10       Impact factor: 54.908

9.  Quantized ionic conductance in nanopores.

Authors:  Michael Zwolak; Johan Lagerqvist; Massimiliano Di Ventra
Journal:  Phys Rev Lett       Date:  2009-09-17       Impact factor: 9.161

  9 in total
  7 in total

1.  Dehydration and ionic conductance quantization in nanopores.

Authors:  Michael Zwolak; James Wilson; Massimiliano Di Ventra
Journal:  J Phys Condens Matter       Date:  2010-11-17       Impact factor: 2.333

2.  Ionic Coulomb blockade in nanopores.

Authors:  Matt Krems; Massimiliano Di Ventra
Journal:  J Phys Condens Matter       Date:  2013-01-10       Impact factor: 2.333

3.  Circuital characterisation of space-charge motion with a time-varying applied bias.

Authors:  Chul Kim; Eun-Yi Moon; Jungho Hwang; Hiki Hong
Journal:  Sci Rep       Date:  2015-07-02       Impact factor: 4.379

4.  Quantifying short-lived events in multistate ionic current measurements.

Authors:  Arvind Balijepalli; Jessica Ettedgui; Andrew T Cornio; Joseph W F Robertson; Kin P Cheung; John J Kasianowicz; Canute Vaz
Journal:  ACS Nano       Date:  2014-01-14       Impact factor: 15.881

5.  History-dependent ion transport through conical nanopipettes and the implications in energy conversion dynamics at nanoscale interfaces.

Authors:  Yan Li; Dengchao Wang; Maksim M Kvetny; Warren Brown; Juan Liu; Gangli Wang
Journal:  Chem Sci       Date:  2014-08-20       Impact factor: 9.825

6.  Short channel effects on electrokinetic energy conversion in solid-state nanopores.

Authors:  Yan Zhang; Yuhui He; Makusu Tsutsui; Xiang Shui Miao; Masateru Taniguchi
Journal:  Sci Rep       Date:  2017-04-25       Impact factor: 4.379

7.  Capacitive neural network with neuro-transistors.

Authors:  Zhongrui Wang; Mingyi Rao; Jin-Woo Han; Jiaming Zhang; Peng Lin; Yunning Li; Can Li; Wenhao Song; Shiva Asapu; Rivu Midya; Ye Zhuo; Hao Jiang; Jung Ho Yoon; Navnidhi Kumar Upadhyay; Saumil Joshi; Miao Hu; John Paul Strachan; Mark Barnell; Qing Wu; Huaqiang Wu; Qinru Qiu; R Stanley Williams; Qiangfei Xia; J Joshua Yang
Journal:  Nat Commun       Date:  2018-08-10       Impact factor: 14.919

  7 in total

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