Literature DB >> 2057356

Tobacco nuclear gene for the 31 kd chloroplast ribonucleoprotein: genomic organization, sequence analysis and expression.

Y Q Li1, L Z Ye, M Sugita, M Sugiura.   

Abstract

We have previously identified three chloroplast ribonucleoproteins and characterized their cDNAs. Here we present the genomic organization, sequence and expression of one of their genes. The 31 kd ribonucleoprotein (cp31) from tobacco (Nicotiana sylvestris) chloroplasts is coded for by a single-copy nuclear gene. This gene was isolated and its sequence was determined. The gene contains four exons and three introns. The position of its first intron is conserved among the genes for the maize abscisic acid-induced glycine-rich protein, the human hnRNP A1 protein and cp31. The transcription start site was determined to be 168 bp upstream from the translational initiation codon in both leaf and root tissues. No alternatively spliced transcripts was detected, suggesting that a diversity of chloroplast ribonucleoproteins is generated probably by gene amplification rather than alternative splicing.

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Year:  1991        PMID: 2057356      PMCID: PMC328261          DOI: 10.1093/nar/19.11.2987

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  47 in total

Review 1.  Gene expression in response to abscisic acid and osmotic stress.

Authors:  K Skriver; J Mundy
Journal:  Plant Cell       Date:  1990-06       Impact factor: 11.277

2.  Evolutionary transfer of the chloroplast tufA gene to the nucleus.

Authors:  S L Baldauf; J D Palmer
Journal:  Nature       Date:  1990-03-15       Impact factor: 49.962

3.  Mutation at the Chlamydomonas nuclear NAC2 locus specifically affects stability of the chloroplast psbD transcript encoding polypeptide D2 of PS II.

Authors:  M R Kuchka; M Goldschmidt-Clermont; J van Dillewijn; J D Rochaix
Journal:  Cell       Date:  1989-09-08       Impact factor: 41.582

4.  Potential for two isoforms of the A1 ribonucleoprotein in Xenopus laevis.

Authors:  B K Kay; R K Sawhney; S H Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  1990-02       Impact factor: 11.205

5.  The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals.

Authors:  J Hiratsuka; H Shimada; R Whittier; T Ishibashi; M Sakamoto; M Mori; C Kondo; Y Honji; C R Sun; B Y Meng
Journal:  Mol Gen Genet       Date:  1989-06

6.  Genes for the ribosomal proteins S12 and S7 and elongation factors EF-G and EF-Tu of the cyanobacterium, Anacystis nidulans: structural homology between 16S rRNA and S7 mRNA.

Authors:  B Y Meng; K Shinozaki; M Sugiura
Journal:  Mol Gen Genet       Date:  1989-03

7.  Isolation of an active gene encoding human hnRNP protein A1. Evidence for alternative splicing.

Authors:  G Biamonti; M Buvoli; M T Bassi; C Morandi; F Cobianchi; S Riva
Journal:  J Mol Biol       Date:  1989-06-05       Impact factor: 5.469

8.  Evidence that introns arose at proto-splice sites.

Authors:  N J Dibb; A J Newman
Journal:  EMBO J       Date:  1989-07       Impact factor: 11.598

9.  Alternative splicing in the human gene for the core protein A1 generates another hnRNP protein.

Authors:  M Buvoli; F Cobianchi; M G Bestagno; A Mangiarotti; M T Bassi; G Biamonti; S Riva
Journal:  EMBO J       Date:  1990-04       Impact factor: 11.598

10.  Blue light regulates the accumulation of two psbD-psbC transcripts in barley chloroplasts.

Authors:  P E Gamble; J E Mullet
Journal:  EMBO J       Date:  1989-10       Impact factor: 11.598

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  15 in total

1.  Diversity of a ribonucleoprotein family in tobacco chloroplasts: two new chloroplast ribonucleoproteins and a phylogenetic tree of ten chloroplast RNA-binding domains.

Authors:  L H Ye; Y Q Li; K Fukami-Kobayashi; M Go; T Konishi; A Watanabe; M Sugiura
Journal:  Nucleic Acids Res       Date:  1991-12-11       Impact factor: 16.971

2.  CSP41, a sequence-specific chloroplast mRNA binding protein, is an endoribonuclease.

Authors:  J Yang; G Schuster; D B Stern
Journal:  Plant Cell       Date:  1996-08       Impact factor: 11.277

3.  Isolation of a novel RNA-binding protein and its association with a large ribonucleoprotein particle present in the nucleoplasm of tobacco cells.

Authors:  S Hanano; M Sugita; M Sugiura
Journal:  Plant Mol Biol       Date:  1996-04       Impact factor: 4.076

4.  cDNA structure, expression and nucleic acid-binding properties of three RNA-binding proteins in tobacco: occurrence of tissue-specific alternative splicing.

Authors:  T Hirose; M Sugita; M Sugiura
Journal:  Nucleic Acids Res       Date:  1993-08-25       Impact factor: 16.971

5.  Characterization of a cDNA encoding a novel type of RNA-binding protein in tobacco: its expression and nucleic acid-binding properties.

Authors:  T Hirose; M Sugita; M Sugiura
Journal:  Mol Gen Genet       Date:  1994-08-15

6.  Structure and expression of a nuclear gene for the PSI-D subunit of photosystem I in Nicotiana sylvestris.

Authors:  Y Yamamoto; H Tsuji; J Obokata
Journal:  Plant Mol Biol       Date:  1993-09       Impact factor: 4.076

7.  Structure and differential expression of two distinct genes encoding the chloroplast elongation factor Tu in tobacco.

Authors:  M Sugita; Y Murayama; M Sugiura
Journal:  Curr Genet       Date:  1994-02       Impact factor: 3.886

8.  Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms.

Authors:  M Ohta; M Sugita; M Sugiura
Journal:  Plant Mol Biol       Date:  1995-02       Impact factor: 4.076

9.  Purification of chloroplast elongation factor Tu and cDNA analysis in tobacco: the existence of two chloroplast elongation factor Tu species.

Authors:  Y Murayama; T Matsubayashi; M Sugita; M Sugiura
Journal:  Plant Mol Biol       Date:  1993-08       Impact factor: 4.076

10.  Extreme heterogeneity of polyadenylation sites in mRNAs encoding chloroplast RNA-binding proteins in Nicotiana plumbaginifolia.

Authors:  U Klahre; M Hemmings-Mieszczak; W Filipowicz
Journal:  Plant Mol Biol       Date:  1995-06       Impact factor: 4.076

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