Literature DB >> 8704159

Isolation of a novel RNA-binding protein and its association with a large ribonucleoprotein particle present in the nucleoplasm of tobacco cells.

S Hanano1, M Sugita, M Sugiura.   

Abstract

A cDNA encoding a protein with a consensus sequence-type RNA-binding domain (CS-RBD) has been isolated from a Nicotiana sylvestris cDNA library. The deduced protein (designated 'RZ-1') contains CS-RBD in its N-terminal half, arginine/aspartic acid repeats in its center and a glycine-rich-C-terminal region in which a zinc finger motif of the CCHC type is present. The corresponding gene appears to be expressed constitutively in all tobacco organs. Immunocytochemical assays revealed that RZ-1 is localized in the nucleoplasm of tobacco cultured cells. Glycerol gradient fractionation of tobacco nuclear lysates showed that RZ-1 is associated with a large ribonucleoprotein particle of around 60 S in size. Nucleic acid-binding assays indicated that RZ-1 binds preferentially to poly (G) and both the CS-RBD and glycine-rich region are necessary for its binding activity. A possible role of RZ-1 is discussed.

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Year:  1996        PMID: 8704159     DOI: 10.1007/BF00020606

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  45 in total

1.  Nucleotide sequence of a cDNA clone encoding a putative glycine-rich protein of 19.7 kDa in Nicotiana sylvestris.

Authors:  J Obokata; M Ohme; N Hayashida
Journal:  Plant Mol Biol       Date:  1991-10       Impact factor: 4.076

Review 2.  Protein kinase phosphorylation site sequences and consensus specificity motifs: tabulations.

Authors:  R B Pearson; B E Kemp
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

3.  A common RNA recognition motif identified within a defined U1 RNA binding domain of the 70K U1 snRNP protein.

Authors:  C C Query; R C Bentley; J D Keene
Journal:  Cell       Date:  1989-04-07       Impact factor: 41.582

4.  Characterization of a cDNA encoding a novel type of RNA-binding protein in tobacco: its expression and nucleic acid-binding properties.

Authors:  T Hirose; M Sugita; M Sugiura
Journal:  Mol Gen Genet       Date:  1994-08-15

Review 5.  Conserved structures and diversity of functions of RNA-binding proteins.

Authors:  C G Burd; G Dreyfuss
Journal:  Science       Date:  1994-07-29       Impact factor: 47.728

6.  Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase.

Authors:  D B Smith; K S Johnson
Journal:  Gene       Date:  1988-07-15       Impact factor: 3.688

7.  Identification of a zinc finger protein that binds to the sterol regulatory element.

Authors:  T B Rajavashisth; A K Taylor; A Andalibi; K L Svenson; A J Lusis
Journal:  Science       Date:  1989-08-11       Impact factor: 47.728

8.  The hnRNP F protein: unique primary structure, nucleic acid-binding properties, and subcellular localization.

Authors:  M J Matunis; J Xing; G Dreyfuss
Journal:  Nucleic Acids Res       Date:  1994-03-25       Impact factor: 16.971

9.  Classification and purification of proteins of heterogeneous nuclear ribonucleoprotein particles by RNA-binding specificities.

Authors:  M S Swanson; G Dreyfuss
Journal:  Mol Cell Biol       Date:  1988-05       Impact factor: 4.272

10.  Chloroplast mRNA 3' end processing requires a nuclear-encoded RNA-binding protein.

Authors:  G Schuster; W Gruissem
Journal:  EMBO J       Date:  1991-06       Impact factor: 11.598

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  13 in total

1.  Genome analysis: RNA recognition motif (RRM) and K homology (KH) domain RNA-binding proteins from the flowering plant Arabidopsis thaliana.

Authors:  Zdravko J Lorković; Andrea Barta
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

2.  Defining the RNA-binding glycine-rich (RBG) gene superfamily: new insights into nomenclature, phylogeny, and evolutionary trends obtained by genome-wide comparative analysis of Arabidopsis, Chinese cabbage, rice and maize genomes.

Authors:  Panneerselvam Krishnamurthy; Jin A Kim; Mi-Jeong Jeong; Chang Ho Kang; Soo In Lee
Journal:  Mol Genet Genomics       Date:  2015-06-30       Impact factor: 3.291

3.  RBP45 and RBP47, two oligouridylate-specific hnRNP-like proteins interacting with poly(A)+ RNA in nuclei of plant cells.

Authors:  Z J Lorković; D A Wieczorek Kirk; U Klahre; M Hemmings-Mieszczak; W Filipowicz
Journal:  RNA       Date:  2000-11       Impact factor: 4.942

4.  A novel family of plant splicing factors with a Zn knuckle motif: examination of RNA binding and splicing activities.

Authors:  S Lopato; R Gattoni; G Fabini; J Stevenin; A Barta
Journal:  Plant Mol Biol       Date:  1999-03       Impact factor: 4.076

5.  Molecular characterization and expression analysis of a glycine-rich RNA-binding protein gene from Malus hupehensis Rehd.

Authors:  Shuncai Wang; Rongchao Wang; Dong Liang; Fengwang Ma; Huairui Shu
Journal:  Mol Biol Rep       Date:  2011-07-21       Impact factor: 2.316

6.  Gene expression and genetic mapping analyses of a perennial ryegrass glycine-rich RNA-binding protein gene suggest a role in cold adaptation.

Authors:  H Shinozuka; H Hisano; S Yoneyama; Y Shimamoto; E S Jones; J W Forster; T Yamada; A Kanazawa
Journal:  Mol Genet Genomics       Date:  2006-01-28       Impact factor: 3.291

7.  Genome-wide identification, phylogenetic analysis, and expression profiling of glycine-rich RNA-binding protein (GRPs) genes in seeded and seedless grapes (Vitis vinifera).

Authors:  Yujin Tang; Congbo Huang; Yan Li; Yuejin Wang; Chaohong Zhang
Journal:  Physiol Mol Biol Plants       Date:  2021-10-11

8.  RNA Binding Proteins RZ-1B and RZ-1C Play Critical Roles in Regulating Pre-mRNA Splicing and Gene Expression during Development in Arabidopsis.

Authors:  Zhe Wu; Danling Zhu; Xiaoya Lin; Jin Miao; Lianfeng Gu; Xian Deng; Qian Yang; Kangtai Sun; Danmeng Zhu; Xiaofeng Cao; Tomohiko Tsuge; Caroline Dean; Takashi Aoyama; Hongya Gu; Li-Jia Qu
Journal:  Plant Cell       Date:  2015-12-31       Impact factor: 11.277

9.  AtGRP2, a cold-induced nucleo-cytoplasmic RNA-binding protein, has a role in flower and seed development.

Authors:  Adriana Flores Fusaro; Silvia Nora Bocca; Rose Lucia Braz Ramos; Rosa Maria Barrôco; Claudia Magioli; Vanessa Cardeal Jorge; Tatiana Cardoso Coutinho; Camila Martins Rangel-Lima; Riet De Rycke; Dirk Inzé; Gilbert Engler; Gilberto Sachetto-Martins
Journal:  Planta       Date:  2006-11-23       Impact factor: 4.540

10.  Cold shock domain proteins and glycine-rich RNA-binding proteins from Arabidopsis thaliana can promote the cold adaptation process in Escherichia coli.

Authors:  Jin Sun Kim; Su Jung Park; Kyung Jin Kwak; Yeon Ok Kim; Joo Yeol Kim; Jinkyung Song; Boseung Jang; Che-Hun Jung; Hunseung Kang
Journal:  Nucleic Acids Res       Date:  2006-12-14       Impact factor: 16.971

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