Literature DB >> 20556462

Active transport and cluster formation on 2D networks.

P Greulich1, L Santen.   

Abstract

We introduce a model for active transport on inhomogeneous networks embedded in a diffusive environment which is motivated by vesicular transport on actin filaments. In the presence of a hard-core interaction, particle clusters are observed that exhibit an algebraically decaying distribution in a large parameter regime, indicating the existence of clusters on all scales. The scale-free behavior can be understood by a mechanism promoting preferential attachment of particles to large clusters. The results are compared with a diffusion-limited aggregation model and active transport on a regular network. For both models we observe aggregation of particles to clusters which are characterized by a finite size scale if the relevant time scales and particle densities are considered.

Mesh:

Year:  2010        PMID: 20556462     DOI: 10.1140/epje/i2010-10603-6

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  27 in total

1.  Emergence of scaling in random networks

Authors: 
Journal:  Science       Date:  1999-10-15       Impact factor: 47.728

2.  Shock formation in an exclusion process with creation and annihilation.

Authors:  M R Evans; R Juhász; L Santen
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-08-19

3.  Clustered bottlenecks in mRNA translation and protein synthesis.

Authors:  Tom Chou; Greg Lakatos
Journal:  Phys Rev Lett       Date:  2004-11-01       Impact factor: 9.161

4.  Intracellular transport of single-headed molecular motors KIF1A.

Authors:  Katsuhiro Nishinari; Yasushi Okada; Andreas Schadschneider; Debashish Chowdhury
Journal:  Phys Rev Lett       Date:  2005-09-07       Impact factor: 9.161

5.  Partially asymmetric exclusion processes with sitewise disorder.

Authors:  Róbert Juhász; Ludger Santen; Ferenc Iglói
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-12-04

6.  Disordered driven lattice gases with boundary reservoirs and Langmuir kinetics.

Authors:  Philip Greulich; Andreas Schadschneider
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-03-11

Review 7.  Theoretical analysis of protein organization in lipid membranes.

Authors:  T Gil; J H Ipsen; O G Mouritsen; M C Sabra; M M Sperotto; M J Zuckermann
Journal:  Biochim Biophys Acta       Date:  1998-11-10

8.  Intracellular transport by single-headed kinesin KIF1A: effects of single-motor mechanochemistry and steric interactions.

Authors:  Philip Greulich; Ashok Garai; Katsuhiro Nishinari; Andreas Schadschneider; Debashish Chowdhury
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-04-05

9.  Kinetic analysis of F-actin depolymerization in polymorphonuclear leukocyte lysates indicates that chemoattractant stimulation increases actin filament number without altering the filament length distribution.

Authors:  M L Cano; D A Lauffenburger; S H Zigmond
Journal:  J Cell Biol       Date:  1991-11       Impact factor: 10.539

10.  The role of Myo2, a yeast class V myosin, in vesicular transport.

Authors:  B Govindan; R Bowser; P Novick
Journal:  J Cell Biol       Date:  1995-03       Impact factor: 10.539

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