Literature DB >> 14525059

Shock formation in an exclusion process with creation and annihilation.

M R Evans1, R Juhász, L Santen.   

Abstract

We investigate shock formation in an asymmetric exclusion process with creation and annihilation of particles in the bulk. We show how the continuum mean-field equations can be studied analytically and hence derive the phase diagrams of the model. In the large system-size limit direct simulations of the model show that the stationary state is correctly described by the mean-field equations, thus the predicted mean-field phase diagrams are expected to be exact. The emergence of shocks and the structure of the phase diagram are discussed. We also analyze the fluctuations of the shock position by using a phenomenological random walk picture of the shock dynamics. The stationary distribution of shock positions is calculated, by virtue of which the numerically determined finite-size scaling behavior of the shock width is explained.

Year:  2003        PMID: 14525059     DOI: 10.1103/PhysRevE.68.026117

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  10 in total

1.  Active transport and cluster formation on 2D networks.

Authors:  P Greulich; L Santen
Journal:  Eur Phys J E Soft Matter       Date:  2010-06-17       Impact factor: 1.890

2.  Domain wall delocalization, dynamics and fluctuations in an exclusion process with two internal states.

Authors:  T Reichenbach; T Franosch; E Frey
Journal:  Eur Phys J E Soft Matter       Date:  2008-09       Impact factor: 1.890

3.  Obstacles on the microtubule reduce the processivity of Kinesin-1 in a minimal in vitro system and in cell extract.

Authors:  Ivo A Telley; Peter Bieling; Thomas Surrey
Journal:  Biophys J       Date:  2009-04-22       Impact factor: 4.033

4.  One-dimensional deterministic transport in neurons measured by dispersion-relation phase spectroscopy.

Authors:  Ru Wang; Zhuo Wang; Joe Leigh; Nahil Sobh; Larry Millet; Martha U Gillette; Alex J Levine; Gabriel Popescu
Journal:  J Phys Condens Matter       Date:  2011-08-23       Impact factor: 2.333

5.  Microtubule length dependence of motor traffic in cells.

Authors:  Yunxin Zhang
Journal:  Eur Phys J E Soft Matter       Date:  2012-10-11       Impact factor: 1.890

6.  Large-scale mRNA translation and the intricate effects of competition for the finite pool of ribosomes.

Authors:  Aditi Jain; Michael Margaliot; Arvind Kumar Gupta
Journal:  J R Soc Interface       Date:  2022-03-09       Impact factor: 4.118

7.  The origins of time-delay in template biopolymerization processes.

Authors:  Luis Mier-y-Terán-Romero; Mary Silber; Vassily Hatzimanikatis
Journal:  PLoS Comput Biol       Date:  2010-04-01       Impact factor: 4.475

8.  A deterministic mathematical model for bidirectional excluded flow with Langmuir kinetics.

Authors:  Yoram Zarai; Michael Margaliot; Tamir Tuller
Journal:  PLoS One       Date:  2017-08-23       Impact factor: 3.240

9.  Global Density Profile For Particle Non-Conserving One Dimensional Transport From Renormalization Group Flows.

Authors:  Sutapa Mukherji; Somendra M Bhattacharjee
Journal:  Sci Rep       Date:  2019-04-05       Impact factor: 4.379

Review 10.  Crowd Control: Effects of Physical Crowding on Cargo Movement in Healthy and Diseased Neurons.

Authors:  Vidur Sabharwal; Sandhya P Koushika
Journal:  Front Cell Neurosci       Date:  2019-10-25       Impact factor: 5.505

  10 in total

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