Literature DB >> 20554824

Mitochondrial DNA targets increase sensitivity of malaria detection using loop-mediated isothermal amplification.

Spencer D Polley1, Yasuyoshi Mori, Julie Watson, Mark D Perkins, Iveth J González, Tsugunori Notomi, Peter L Chiodini, Colin J Sutherland.   

Abstract

Loop-mediated isothermal amplification (LAMP) of DNA offers the ability to detect very small quantities of pathogen DNA following minimal tissue sample processing and is thus an attractive methodology for point-of-care diagnostics. Previous attempts to diagnose malaria by the use of blood samples and LAMP have targeted the parasite small-subunit rRNA gene, with a resultant sensitivity for Plasmodium falciparum of around 100 parasites per microl. Here we describe the use of mitochondrial targets for LAMP-based detection of any Plasmodium genus parasite and of P. falciparum specifically. These new targets allow routine amplification from samples containing as few as five parasites per microl of blood. Amplification is complete within 30 to 40 min and is assessed by real-time turbidimetry, thereby offering rapid diagnosis with greater sensitivity than is achieved by the most skilled microscopist or antigen detection using lateral flow immunoassays.

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Year:  2010        PMID: 20554824      PMCID: PMC2916605          DOI: 10.1128/JCM.00355-10

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  31 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Dependence of malaria detection and species diagnosis by microscopy on parasite density.

Authors:  F Ellis McKenzie; Jeeraphat Sirichaisinthop; R Scott Miller; Robert A Gasser; Chansuda Wongsrichanalai
Journal:  Am J Trop Med Hyg       Date:  2003-10       Impact factor: 2.345

3.  Quality assessment of malaria laboratory diagnosis in South Africa.

Authors:  Leigh Dini; John Frean
Journal:  Trans R Soc Trop Med Hyg       Date:  2003 Nov-Dec       Impact factor: 2.184

4.  Diagnostic disagreement--the lessons learnt from malaria diagnosis in Mpumalanga.

Authors:  D N Durrheim; P J Becker; K Billinghurst
Journal:  S Afr Med J       Date:  1997-08

5.  Detection and identification of the four malaria parasite species infecting humans by PCR amplification.

Authors:  G Snounou
Journal:  Methods Mol Biol       Date:  1996

6.  External quality assessment in the examination of blood films for malarial parasites within Ontario, Canada.

Authors:  S Thomson; R C Lohmann; L Crawford; R Dubash; H Richardson
Journal:  Arch Pathol Lab Med       Date:  2000-01       Impact factor: 5.534

7.  False-positive results of a Plasmodium falciparum histidine-rich protein 2-detecting malaria rapid diagnostic test due to high sensitivity in a community with fluctuating low parasite density.

Authors:  David R Bell; Danny W Wilson; Laura B Martin
Journal:  Am J Trop Med Hyg       Date:  2005-07       Impact factor: 2.345

8.  Accuracy of routine laboratory diagnosis of malaria in the United Kingdom.

Authors:  L M Milne; M S Kyi; P L Chiodini; D C Warhurst
Journal:  J Clin Pathol       Date:  1994-08       Impact factor: 3.411

9.  Sensitive and inexpensive molecular test for falciparum malaria: detecting Plasmodium falciparum DNA directly from heat-treated blood by loop-mediated isothermal amplification.

Authors:  Leo L M Poon; Bonnie W Y Wong; Edmund H T Ma; Kwok H Chan; Larry M C Chow; Wimal Abeyewickreme; Noppadon Tangpukdee; Kwok Y Yuen; Yi Guan; Sornchai Looareesuwan; J S Malik Peiris
Journal:  Clin Chem       Date:  2005-12-08       Impact factor: 8.327

10.  Use of a rapid, single-round, multiplex PCR to detect malarial parasites and identify the species present.

Authors:  D Padley; A H Moody; P L Chiodini; J Saldanha
Journal:  Ann Trop Med Parasitol       Date:  2003-03
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  79 in total

1.  Detection and species identification of malaria parasites by isothermal tHDA amplification directly from human blood without sample preparation.

Authors:  Ying Li; Nirbhay Kumar; Anusha Gopalakrishnan; Christine Ginocchio; Ryhana Manji; Maureen Bythrow; Bertrand Lemieux; Huimin Kong
Journal:  J Mol Diagn       Date:  2013-06-22       Impact factor: 5.568

2.  LAMP, PCR, and real-time PCR detection of Acetobacter aceti in yogurt.

Authors:  Wei Zhou; Yan Zhang; Shuang Wang; Yuehua Li; Jingjing Zhang; Cuixia Zhang; Zan Wang; Zhisheng Zhang
Journal:  Food Sci Biotechnol       Date:  2017-02-28       Impact factor: 2.391

3.  NINA-LAMP compared to microscopy, RDT, and nested PCR for the detection of imported malaria.

Authors:  Abu Naser Mohon; Lydia Da-Yeong Lee; Abebe Genetu Bayih; Asongna Folefoc; Dylan Guelig; Robert A Burton; Paul LaBarre; Wilson Chan; Bonnie Meatherall; Dylan R Pillai
Journal:  Diagn Microbiol Infect Dis       Date:  2015-11-10       Impact factor: 2.803

4.  Comparison of three PCR-based assays for the non-invasive diagnosis of malaria: detection of Plasmodium parasites in blood and saliva.

Authors:  R Singh; D P Singh; R Gupta; D Savargaonkar; O P Singh; N Nanda; R M Bhatt; N Valecha
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2014-05-05       Impact factor: 3.267

5.  Development of loop-mediated isothermal amplification with Plasmodium falciparum unique genes for molecular diagnosis of human malaria.

Authors:  Yijing Zhang; Yi Yao; Weixing Du; Kai Wu; Wenyue Xu; Min Lin; Huabing Tan; Jian Li
Journal:  Pathog Glob Health       Date:  2017-07-06       Impact factor: 2.894

6.  Development of Visually Improved Loop Mediated Isothermal Amplification for the Diagnosis of Plasmodium vivax Malaria in a Tertiary Hospital in Chandigarh, North India.

Authors:  Hargobinder Kaur; Rakesh Sehgal; Devendra Bansal; Ali A Sultan; Ashish Bhalla; Sunit C Singhi
Journal:  Am J Trop Med Hyg       Date:  2018-03-15       Impact factor: 2.345

7.  Detection of Plasmodium falciparum by Light Microscopy, Loop-Mediated Isothermal Amplification, and Polymerase Chain Reaction on Day 3 after Initiation of Artemether-Lumefantrine Treatment for Uncomplicated Malaria in Bagamoyo District, Tanzania: A Comparative Trial.

Authors:  Lwidiko E Mhamilawa; Berit Aydin-Schmidt; Bruno P Mmbando; Billy Ngasala; Ulrika Morris
Journal:  Am J Trop Med Hyg       Date:  2019-11       Impact factor: 2.345

8.  Loop-mediated isothermal amplification assay for rapid diagnosis of malaria infections in an area of endemicity in Thailand.

Authors:  Jetsumon Sattabongkot; Takafumi Tsuboi; Eun-Taek Han; Sirasate Bantuchai; Sureemas Buates
Journal:  J Clin Microbiol       Date:  2014-02-26       Impact factor: 5.948

9.  Development of a loop-mediated isothermal amplification method for detection of Histoplasma capsulatum DNA in clinical samples.

Authors:  Christina M Scheel; Yitian Zhou; Raquel C Theodoro; Bethany Abrams; S Arunmozhi Balajee; Anastasia P Litvintseva
Journal:  J Clin Microbiol       Date:  2013-11-27       Impact factor: 5.948

10.  Performance of Loop-Mediated Isothermal Amplification for the Identification of Submicroscopic Plasmodium falciparum Infection in Uganda.

Authors:  Shereen Katrak; Maxwell Murphy; Patience Nayebare; John Rek; Mary Smith; Emmanuel Arinaitwe; Joaniter I Nankabirwa; Moses Kamya; Grant Dorsey; Philip J Rosenthal; Bryan Greenhouse
Journal:  Am J Trop Med Hyg       Date:  2017-10-05       Impact factor: 2.345

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