Literature DB >> 20545861

Social networking between mobile introns and their host genes.

Barry Stoddard1, Marlene Belfort.   

Abstract

Homing endonucleases have long been known as the orchestrators of intron mobility. However, the extent of their influence on the intron and its genetic and cellular environment is still being elucidated. The accompanying paper emphasizes the importance of temporal control of endonuclease expression on splicing, expression of the host gene and cellular metabolism, while it raises questions to guide future inquiry.

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Year:  2010        PMID: 20545861      PMCID: PMC2943980          DOI: 10.1111/j.1365-2958.2010.07217.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  13 in total

Review 1.  Invasion of a multitude of genetic niches by mobile endonuclease genes.

Authors:  F S Gimble
Journal:  FEMS Microbiol Lett       Date:  2000-04-15       Impact factor: 2.742

Review 2.  Barriers to intron promiscuity in bacteria.

Authors:  D R Edgell; M Belfort; D A Shub
Journal:  J Bacteriol       Date:  2000-10       Impact factor: 3.490

3.  Importance of a single base pair for discrimination between intron-containing and intronless alleles by endonuclease I-BmoI.

Authors:  David R Edgell; Matthew J Stanger; Marlene Belfort
Journal:  Curr Biol       Date:  2003-05-27       Impact factor: 10.834

4.  Intron-encoded homing endonuclease I-TevI also functions as a transcriptional autorepressor.

Authors:  David R Edgell; Victoria Derbyshire; Patrick Van Roey; Stephen LaBonne; Matthew J Stanger; Zhong Li; Thomas M Boyd; David A Shub; Marlene Belfort
Journal:  Nat Struct Mol Biol       Date:  2004-09-07       Impact factor: 15.369

Review 5.  Homing endonuclease genes: the rise and fall and rise again of a selfish element.

Authors:  Austin Burt; Vassiliki Koufopanou
Journal:  Curr Opin Genet Dev       Date:  2004-12       Impact factor: 5.578

6.  Coevolution of a homing endonuclease and its host target sequence.

Authors:  Michelle Scalley-Kim; Audrey McConnell-Smith; Barry L Stoddard
Journal:  J Mol Biol       Date:  2007-08-02       Impact factor: 5.469

7.  Structural conservation among three homologous introns of bacteriophage T4 and the group I introns of eukaryotes.

Authors:  D A Shub; J M Gott; M Q Xu; B F Lang; F Michel; J Tomaschewski; J Pedersen-Lane; M Belfort
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

8.  Recurrent invasion and extinction of a selfish gene.

Authors:  M R Goddard; A Burt
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

Review 9.  Introns as mobile genetic elements.

Authors:  A M Lambowitz; M Belfort
Journal:  Annu Rev Biochem       Date:  1993       Impact factor: 23.643

10.  Multiple controls regulate the expression of mobE, an HNH homing endonuclease gene embedded within a ribonucleotide reductase gene of phage Aeh1.

Authors:  Ewan A Gibb; David R Edgell
Journal:  J Bacteriol       Date:  2007-04-20       Impact factor: 3.490

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  8 in total

Review 1.  Homing endonucleases: from microbial genetic invaders to reagents for targeted DNA modification.

Authors:  Barry L Stoddard
Journal:  Structure       Date:  2011-01-12       Impact factor: 5.006

Review 2.  Pragmatic turn in biology: From biological molecules to genetic content operators.

Authors:  Guenther Witzany
Journal:  World J Biol Chem       Date:  2014-08-26

Review 3.  Homing endonucleases: from genetic anomalies to programmable genomic clippers.

Authors:  Marlene Belfort; Richard P Bonocora
Journal:  Methods Mol Biol       Date:  2014

4.  Activity, specificity and structure of I-Bth0305I: a representative of a new homing endonuclease family.

Authors:  Gregory K Taylor; Daniel F Heiter; Shmuel Pietrokovski; Barry L Stoddard
Journal:  Nucleic Acids Res       Date:  2011-09-02       Impact factor: 16.971

5.  Comprehensive homing endonuclease target site specificity profiling reveals evolutionary constraints and enables genome engineering applications.

Authors:  Hui Li; Umut Y Ulge; Blake T Hovde; Lindsey A Doyle; Raymond J Monnat
Journal:  Nucleic Acids Res       Date:  2011-11-25       Impact factor: 16.971

Review 6.  RNA sociology: group behavioral motifs of RNA consortia.

Authors:  Guenther Witzany
Journal:  Life (Basel)       Date:  2014-11-24

7.  Jumbo Phages: A Comparative Genomic Overview of Core Functions and Adaptions for Biological Conflicts.

Authors:  Lakshminarayan M Iyer; Vivek Anantharaman; Arunkumar Krishnan; A Maxwell Burroughs; L Aravind
Journal:  Viruses       Date:  2021-01-05       Impact factor: 5.048

8.  Cluster J mycobacteriophages: intron splicing in capsid and tail genes.

Authors:  Welkin H Pope; Deborah Jacobs-Sera; Aaron A Best; Gregory W Broussard; Pamela L Connerly; Rebekah M Dedrick; Timothy A Kremer; Susan Offner; Amenawon H Ogiefo; Marie C Pizzorno; Kate Rockenbach; Daniel A Russell; Emily L Stowe; Joseph Stukey; Sarah A Thibault; James F Conway; Roger W Hendrix; Graham F Hatfull
Journal:  PLoS One       Date:  2013-07-09       Impact factor: 3.240

  8 in total

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