Literature DB >> 20539034

Characterizing proteins of unknown function: orphan cytochrome p450 enzymes as a paradigm.

F Peter Guengerich1, Zhongmei Tang, S Giovanna Salamanca-Pinzón, Qian Cheng.   

Abstract

With the rapid completion of genomic sequences of organisms today, we have far more gene products than functions we can ascribe. A number of experimental strategies have been developed and applied, both in vitro and in vivo, to put functions to these orphan proteins. The "deorphanization" of human and Streptomyces cytochrome P450 enzymes is considered quite important for pharmacology, with ramifications for the use of clinical therapeutics. The myriad of possibilities is too enormous to screen one reaction at a time, thus metabolomic or proteomic screens with complex biological samples are promising current strategies.

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Year:  2010        PMID: 20539034      PMCID: PMC2895278          DOI: 10.1124/mi.10.3.6

Source DB:  PubMed          Journal:  Mol Interv        ISSN: 1534-0384


  81 in total

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Journal:  Cell       Date:  1998-01-09       Impact factor: 41.582

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7.  Studies on the expression and metabolic capabilities of human liver cytochrome P450IIIA5 (HLp3).

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Journal:  Mol Pharmacol       Date:  1990-08       Impact factor: 4.436

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Authors:  S Andersson; D W Russell
Journal:  Proc Natl Acad Sci U S A       Date:  1990-05       Impact factor: 11.205

9.  The nuclear orphan receptor CAR-retinoid X receptor heterodimer activates the phenobarbital-responsive enhancer module of the CYP2B gene.

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Journal:  Mol Cell Biol       Date:  1998-10       Impact factor: 4.272

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  17 in total

Review 1.  Contributions of human enzymes in carcinogen metabolism.

Authors:  Slobodan Rendic; F Peter Guengerich
Journal:  Chem Res Toxicol       Date:  2012-05-10       Impact factor: 3.739

2.  Oxidation of endogenous N-arachidonoylserotonin by human cytochrome P450 2U1.

Authors:  Michal Siller; Sandeep Goyal; Francis K Yoshimoto; Yi Xiao; Shouzou Wei; F Peter Guengerich
Journal:  J Biol Chem       Date:  2014-02-21       Impact factor: 5.157

Review 3.  Orphans in the human cytochrome P450 superfamily: approaches to discovering functions and relevance in pharmacology.

Authors:  F Peter Guengerich; Qian Cheng
Journal:  Pharmacol Rev       Date:  2011-07-07       Impact factor: 25.468

Review 4.  Cytochromes P450 for natural product biosynthesis in Streptomyces: sequence, structure, and function.

Authors:  Jeffrey D Rudolf; Chin-Yuan Chang; Ming Ma; Ben Shen
Journal:  Nat Prod Rep       Date:  2017-08-30       Impact factor: 13.423

5.  Heterologous expression and characterization of the sterol 14α-demethylase CYP51F1 from Candida albicans.

Authors:  Hyoung-Goo Park; Im-Soon Lee; Young-Jin Chun; Chul-Ho Yun; Jonathan B Johnston; Paul R Ortiz de Montellano; Donghak Kim
Journal:  Arch Biochem Biophys       Date:  2011-02-17       Impact factor: 4.013

6.  Cytochrome p450 mRNA expression in the rodent brain: species-, sex-, and region-dependent differences.

Authors:  Marianna Stamou; Xianai Wu; Izabela Kania-Korwel; Hans-Joachim Lehmler; Pamela J Lein
Journal:  Drug Metab Dispos       Date:  2013-11-19       Impact factor: 3.922

Review 7.  Finding homes for orphan cytochrome P450s: CYP4V2 and CYP4F22 in disease states.

Authors:  Edward J Kelly; Mariko Nakano; Priyanka Rohatgi; Vladimir Yarov-Yarovoy; Allan E Rettie
Journal:  Mol Interv       Date:  2011-04

Review 8.  Approaches to deorphanization of human and microbial cytochrome P450 enzymes.

Authors:  F Peter Guengerich; Zhongmei Tang; Qian Cheng; S Giovanna Salamanca-Pinzón
Journal:  Biochim Biophys Acta       Date:  2010-05-20

9.  Identification of endogenous substrates of orphan cytochrome P450 enzymes through the use of untargeted metabolomics approaches.

Authors:  Qian Cheng; F Peter Guengerich
Journal:  Methods Mol Biol       Date:  2013

10.  Global untargeted serum metabolomic analyses nominate metabolic pathways responsive to loss of expression of the orphan metallo β-lactamase, MBLAC1.

Authors:  Chelsea L Gibson; Simona G Codreanu; Alexandra C Schrimpe-Rutledge; Cassandra L Retzlaff; Jane Wright; Doug P Mortlock; Stacy D Sherrod; John A McLean; Randy D Blakely
Journal:  Mol Omics       Date:  2018-06-12
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