Literature DB >> 20538016

High-throughput study of synaptic transmission at the neuromuscular junction enabled by optogenetics and microfluidics.

Jeffrey N Stirman1, Martin Brauner, Alexander Gottschalk, Hang Lu.   

Abstract

Over the past several years, optogenetic techniques have become widely used to help elucidate a variety of neuroscience problems. The unique optical control of neurons within a variety of organisms provided by optogenetics allows researchers to probe neural circuits and investigate neuronal function in a highly specific and controllable fashion. Recently, optogenetic techniques have been introduced to investigate synaptic transmission in the nematode Caenorhabditis elegans. For synaptic transmission studies, although quantitative, this technique is manual and very low-throughput. As it is, it is difficult to apply this technique to genetic studies. In this paper, we enhance this new tool by combining it with microfluidics technology and computer automation. This allows us to increase the assay throughput by several orders of magnitude as compared to the current standard approach, as well as improving standardization and consistency in data gathering. We also demonstrate the ability to infuse drugs to worms during optogenetic experiments using microfluidics. Together, these technologies will enable high-throughput genetic studies such as those of synaptic function. (c) 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20538016      PMCID: PMC2908193          DOI: 10.1016/j.jneumeth.2010.05.019

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  15 in total

1.  One GABA and two acetylcholine receptors function at the C. elegans neuromuscular junction.

Authors:  J E Richmond; E M Jorgensen
Journal:  Nat Neurosci       Date:  1999-09       Impact factor: 24.884

2.  Monolithic microfabricated valves and pumps by multilayer soft lithography.

Authors:  M A Unger; H P Chou; T Thorsen; A Scherer; S R Quake
Journal:  Science       Date:  2000-04-07       Impact factor: 47.728

3.  The structure of the nervous system of the nematode Caenorhabditis elegans.

Authors:  J G White; E Southgate; J N Thomson; S Brenner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1986-11-12       Impact factor: 6.237

4.  Continuous perfusion microfluidic cell culture array for high-throughput cell-based assays.

Authors:  Paul J Hung; Philip J Lee; Poorya Sabounchi; Robert Lin; Luke P Lee
Journal:  Biotechnol Bioeng       Date:  2005-01-05       Impact factor: 4.530

5.  Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.

Authors:  Georg Nagel; Martin Brauner; Jana F Liewald; Nona Adeishvili; Ernst Bamberg; Alexander Gottschalk
Journal:  Curr Biol       Date:  2005-12-20       Impact factor: 10.834

6.  Tracking lineages of single cells in lines using a microfluidic device.

Authors:  Amy C Rowat; James C Bird; Jeremy J Agresti; Oliver J Rando; David A Weitz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-13       Impact factor: 11.205

7.  Optogenetic analysis of synaptic function.

Authors:  Jana F Liewald; Martin Brauner; Greg J Stephens; Magali Bouhours; Christian Schultheis; Mei Zhen; Alexander Gottschalk
Journal:  Nat Methods       Date:  2008-09-14       Impact factor: 28.547

8.  Optical interrogation of neural circuits in Caenorhabditis elegans.

Authors:  Zengcai V Guo; Anne C Hart; Sharad Ramanathan
Journal:  Nat Methods       Date:  2009-11-08       Impact factor: 28.547

9.  Optical deconstruction of parkinsonian neural circuitry.

Authors:  Viviana Gradinaru; Murtaza Mogri; Kimberly R Thompson; Jaimie M Henderson; Karl Deisseroth
Journal:  Science       Date:  2009-03-19       Impact factor: 47.728

10.  Dimensionality and dynamics in the behavior of C. elegans.

Authors:  Greg J Stephens; Bethany Johnson-Kerner; William Bialek; William S Ryu
Journal:  PLoS Comput Biol       Date:  2008-04-25       Impact factor: 4.475

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  28 in total

1.  A perspective on optical developments in microfluidic platforms for Caenorhabditis elegans research.

Authors:  Guillaume Aubry; Hang Lu
Journal:  Biomicrofluidics       Date:  2014-02-13       Impact factor: 2.800

Review 2.  Microfluidic tools for developmental studies of small model organisms--nematodes, fruit flies, and zebrafish.

Authors:  Hyundoo Hwang; Hang Lu
Journal:  Biotechnol J       Date:  2012-11-19       Impact factor: 4.677

3.  A multi-channel device for high-density target-selective stimulation and long-term monitoring of cells and subcellular features in C. elegans.

Authors:  Hyewon Lee; Shin Ae Kim; Sean Coakley; Paula Mugno; Marc Hammarlund; Massimo A Hilliard; Hang Lu
Journal:  Lab Chip       Date:  2014-09-26       Impact factor: 6.799

4.  A multispectral optical illumination system with precise spatiotemporal control for the manipulation of optogenetic reagents.

Authors:  Jeffrey N Stirman; Matthew M Crane; Steven J Husson; Alexander Gottschalk; Hang Lu
Journal:  Nat Protoc       Date:  2012-01-12       Impact factor: 13.491

5.  Quantitative screening of genes regulating tryptophan hydroxylase transcription in Caenorhabditis elegans using microfluidics and an adaptive algorithm.

Authors:  Hyewon Lee; Matthew M Crane; Yun Zhang; Hang Lu
Journal:  Integr Biol (Camb)       Date:  2013-02       Impact factor: 2.192

Review 6.  Animal microsurgery using microfluidics.

Authors:  Jeffrey N Stirman; Bethany Harker; Hang Lu; Matthew M Crane
Journal:  Curr Opin Biotechnol       Date:  2013-09-12       Impact factor: 9.740

Review 7.  The development and application of optogenetics.

Authors:  Lief Fenno; Ofer Yizhar; Karl Deisseroth
Journal:  Annu Rev Neurosci       Date:  2011       Impact factor: 12.449

8.  Meeting report: 2010 Caenorhabditis elegans Neurobiology Meeting, University of Wisconsin, USA.

Authors:  Ben Mulcahy; Ben Ient
Journal:  Invert Neurosci       Date:  2010-11-11

Review 9.  Using C. elegans to decipher the cellular and molecular mechanisms underlying neurodevelopmental disorders.

Authors:  Carlos Bessa; Patrícia Maciel; Ana João Rodrigues
Journal:  Mol Neurobiol       Date:  2013-03-14       Impact factor: 5.590

10.  Molecular evolution of troponin I and a role of its N-terminal extension in nematode locomotion.

Authors:  Dawn E Barnes; Hyundoo Hwang; Kanako Ono; Hang Lu; Shoichiro Ono
Journal:  Cytoskeleton (Hoboken)       Date:  2016-03
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