Literature DB >> 23161817

Microfluidic tools for developmental studies of small model organisms--nematodes, fruit flies, and zebrafish.

Hyundoo Hwang1, Hang Lu.   

Abstract

Studying the genetics of development with small model organisms such as the zebrafish (Danio Rerio), the fruit fly (Drosophila melanogaster), and the soil-dwelling nematode (Caenorhabditis elegans), provide unique opportunities for understanding related processes and diseases in humans. These model organisms also have potential for use in drug discovery and toxicity-screening applications. There have been sweeping developments in microfabrication and microfluidic technologies for manipulating and imaging small objects, including small model organisms, which allow high-throughput quantitative biological studies. Here, we review recent progress in microfluidic tools able to manipulate small organisms and project future directions and applications of these techniques and technologies.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 23161817      PMCID: PMC3918482          DOI: 10.1002/biot.201200129

Source DB:  PubMed          Journal:  Biotechnol J        ISSN: 1860-6768            Impact factor:   4.677


  98 in total

1.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

2.  Multimodal fast optical interrogation of neural circuitry.

Authors:  Feng Zhang; Li-Ping Wang; Martin Brauner; Jana F Liewald; Kenneth Kay; Natalie Watzke; Phillip G Wood; Ernst Bamberg; Georg Nagel; Alexander Gottschalk; Karl Deisseroth
Journal:  Nature       Date:  2007-04-05       Impact factor: 49.962

3.  Gravity force transduced by the MEC-4/MEC-10 DEG/ENaC channel modulates DAF-16/FoxO activity in Caenorhabditis elegans.

Authors:  Nahui Kim; Catherine M Dempsey; Chih-Jen Kuan; Jim V Zoval; Eyleen O'Rourke; Gary Ruvkun; Marc J Madou; Ji Y Sze
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

4.  Bending amplitude - a new quantitative assay of C. elegans locomotion: identification of phenotypes for mutants in genes encoding muscle focal adhesion components.

Authors:  John F Nahabedian; Hiroshi Qadota; Jeffrey N Stirman; Hang Lu; Guy M Benian
Journal:  Methods       Date:  2011-11-22       Impact factor: 3.608

5.  An automated microfluidic platform for calcium imaging of chemosensory neurons in Caenorhabditis elegans.

Authors:  Trushal Vijaykumar Chokshi; Daphne Bazopoulou; Nikos Chronis
Journal:  Lab Chip       Date:  2010-09-01       Impact factor: 6.799

6.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.

Authors:  Georg Nagel; Tanjef Szellas; Wolfram Huhn; Suneel Kateriya; Nona Adeishvili; Peter Berthold; Doris Ollig; Peter Hegemann; Ernst Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

7.  An electroporation microchip system for the transfection of zebrafish embryos using quantum dots and GFP genes for evaluation.

Authors:  Keng-Shiang Huang; Yu-Cheng Lin; Kai-Chun Su; Hung-Yi Chen
Journal:  Biomed Microdevices       Date:  2007-10       Impact factor: 2.838

8.  Optogenetics.

Authors:  Karl Deisseroth
Journal:  Nat Methods       Date:  2010-12-20       Impact factor: 28.547

9.  Real-time multimodal optical control of neurons and muscles in freely behaving Caenorhabditis elegans.

Authors:  Jeffrey N Stirman; Matthew M Crane; Steven J Husson; Sebastian Wabnig; Christian Schultheis; Alexander Gottschalk; Hang Lu
Journal:  Nat Methods       Date:  2011-01-16       Impact factor: 28.547

10.  Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy.

Authors:  Philipp J Keller; Annette D Schmidt; Anthony Santella; Khaled Khairy; Zhirong Bao; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Nat Methods       Date:  2010-07-04       Impact factor: 28.547

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  13 in total

1.  Microstructured Surface Arrays for Injection of Zebrafish Larvae.

Authors:  Felix Ellett; Daniel Irimia
Journal:  Zebrafish       Date:  2017-02-02       Impact factor: 1.985

2.  Correlative imaging across microscopy platforms using the fast and accurate relocation of microscopic experimental regions (FARMER) method.

Authors:  Toan Huynh; Matthew K Daddysman; Ying Bao; Alan Selewa; Andrey Kuznetsov; Louis H Philipson; Norbert F Scherer
Journal:  Rev Sci Instrum       Date:  2017-05       Impact factor: 1.523

3.  A microfluidic device to study electrotaxis and dopaminergic system of zebrafish larvae.

Authors:  Amir Reza Peimani; Georg Zoidl; Pouya Rezai
Journal:  Biomicrofluidics       Date:  2018-02-07       Impact factor: 2.800

Review 4.  Animal microsurgery using microfluidics.

Authors:  Jeffrey N Stirman; Bethany Harker; Hang Lu; Matthew M Crane
Journal:  Curr Opin Biotechnol       Date:  2013-09-12       Impact factor: 9.740

5.  Microfluidic systems for modeling human development.

Authors:  Makenzie G Bonner; Hemanth Gudapati; Xingrui Mou; Samira Musah
Journal:  Development       Date:  2022-02-14       Impact factor: 6.868

6.  Studying the Symbiotic Bacterium Xenorhabdus nematophila in Individual, Living Steinernema carpocapsae Nematodes Using Microfluidic Systems.

Authors:  Matthew D Stilwell; Mengyi Cao; Heidi Goodrich-Blair; Douglas B Weibel
Journal:  mSphere       Date:  2018-01-03       Impact factor: 4.389

7.  Automated high-throughput light-sheet fluorescence microscopy of larval zebrafish.

Authors:  Savannah L Logan; Christopher Dudley; Ryan P Baker; Michael J Taormina; Edouard A Hay; Raghuveer Parthasarathy
Journal:  PLoS One       Date:  2018-11-14       Impact factor: 3.240

8.  Zebrafish on a chip: a novel platform for real-time monitoring of drug-induced developmental toxicity.

Authors:  Yinbao Li; Fan Yang; Zuanguang Chen; Lijuan Shi; Beibei Zhang; Jianbin Pan; Xinchun Li; Duanping Sun; Hongzhi Yang
Journal:  PLoS One       Date:  2014-04-14       Impact factor: 3.240

9.  Assessment of biocompatibility of 3D printed photopolymers using zebrafish embryo toxicity assays.

Authors:  N P Macdonald; F Zhu; C J Hall; J Reboud; P S Crosier; E E Patton; D Wlodkowic; J M Cooper
Journal:  Lab Chip       Date:  2016-01-21       Impact factor: 6.799

10.  A Micro-Optic Stalk (μOS) System to Model the Collective Migration of Retinal Neuroblasts.

Authors:  Stephanie Zhang; Miles Markey; Caroline D Pena; Tadmiri Venkatesh; Maribel Vazquez
Journal:  Micromachines (Basel)       Date:  2020-03-31       Impact factor: 2.891

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