Literature DB >> 20525719

Association of COPD candidate genes with computed tomography emphysema and airway phenotypes in severe COPD.

W J Kim1, E Hoffman, J Reilly, C Hersh, D Demeo, G Washko, E K Silverman.   

Abstract

The principal determining factors influencing the development of the airway disease and emphysema components of chronic obstructive pulmonary disease (COPD) have not been clearly defined. Genetic variability in COPD patients might influence the varying degrees of involvement of airway disease and emphysema. Therefore, we investigated the genetic association of single nucleotide polymorphisms (SNPs) in COPD candidate genes for association with emphysema severity and airway wall thickness phenotypes. Polymorphisms in six candidate genes were analysed in 379 subjects of the National Emphysema Treatment Trial (NETT) Genetics Ancillary Study with quantitative chest computed tomography (CT) data. Genetic association with per cent of lung area below -950 HU (LAA950), airway wall thickness, and derived square root wall area (SRWA) of 10-mm internal perimeter airways were investigated. Three SNPs in EPHX1, five SNPs in SERPINE2 and one SNP in GSTP1 were significantly associated with LAA950. Five SNPs in TGFB1, two SNPs in EPHX1, one SNP in SERPINE2 and two SNPs in ADRB2 were associated with airway wall phenotypes in NETT. In conclusion, several COPD candidate genes showed evidence for association with airway wall thickness and emphysema severity using CT in a severe COPD population. Further investigation will be required to replicate these genetic associations for emphysema and airway wall phenotypes.

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Year:  2010        PMID: 20525719      PMCID: PMC3074301          DOI: 10.1183/09031936.00173009

Source DB:  PubMed          Journal:  Eur Respir J        ISSN: 0903-1936            Impact factor:   16.671


  26 in total

1.  Efficiency and power in genetic association studies.

Authors:  Paul I W de Bakker; Roman Yelensky; Itsik Pe'er; Stacey B Gabriel; Mark J Daly; David Altshuler
Journal:  Nat Genet       Date:  2005-10-23       Impact factor: 38.330

2.  Attempted replication of reported chronic obstructive pulmonary disease candidate gene associations.

Authors:  Craig P Hersh; Dawn L Demeo; Christoph Lange; Augusto A Litonjua; John J Reilly; David Kwiatkowski; Nan Laird; Jody S Sylvia; David Sparrow; Frank E Speizer; Scott T Weiss; Edwin K Silverman
Journal:  Am J Respir Cell Mol Biol       Date:  2005-04-07       Impact factor: 6.914

Review 3.  Computed tomographic imaging of the airways: relationship to structure and function.

Authors:  P A de Jong; N L Müller; P D Paré; H O Coxson
Journal:  Eur Respir J       Date:  2005-07       Impact factor: 16.671

4.  Computed tomographic measurements of airway dimensions and emphysema in smokers. Correlation with lung function.

Authors:  Y Nakano; S Muro; H Sakai; T Hirai; K Chin; M Tsukino; K Nishimura; H Itoh; P D Paré; J C Hogg; M Mishima
Journal:  Am J Respir Crit Care Med       Date:  2000-09       Impact factor: 21.405

5.  Association between polymorphism in gene for microsomal epoxide hydrolase and susceptibility to emphysema.

Authors:  C A Smith; D J Harrison
Journal:  Lancet       Date:  1997-08-30       Impact factor: 79.321

6.  Association of tumor necrosis factor-alpha gene promoter polymorphism with low attenuation areas on high-resolution CT in patients with COPD.

Authors:  Seiichiro Sakao; Koichiro Tatsumi; Hidetoshi Igari; Reiko Watanabe; Yuji Shino; Hiroshi Shirasawa; Takayuki Kuriyama
Journal:  Chest       Date:  2002-08       Impact factor: 9.410

7.  The transforming growth factor-beta1 (TGFB1) gene is associated with chronic obstructive pulmonary disease (COPD).

Authors:  Juan C Celedón; Christoph Lange; Benjamin A Raby; Augusto A Litonjua; Lyle J Palmer; Dawn L DeMeo; John J Reilly; David J Kwiatkowski; Harold A Chapman; Nan Laird; Jody S Sylvia; Melvin Hernandez; Frank E Speizer; Scott T Weiss; Edwin K Silverman
Journal:  Hum Mol Genet       Date:  2004-06-02       Impact factor: 6.150

8.  A randomized trial comparing lung-volume-reduction surgery with medical therapy for severe emphysema.

Authors:  Alfred Fishman; Fernando Martinez; Keith Naunheim; Steven Piantadosi; Robert Wise; Andrew Ries; Gail Weinmann; Douglas E Wood
Journal:  N Engl J Med       Date:  2003-05-20       Impact factor: 91.245

9.  Loss of integrin alpha(v)beta6-mediated TGF-beta activation causes Mmp12-dependent emphysema.

Authors:  David G Morris; Xiaozhu Huang; Naftali Kaminski; Yanli Wang; Steven D Shapiro; Gregory Dolganov; Adam Glick; Dean Sheppard
Journal:  Nature       Date:  2003-03-13       Impact factor: 49.962

10.  CT metrics of airway disease and emphysema in severe COPD.

Authors:  Woo Jin Kim; Edwin K Silverman; Eric Hoffman; Gerard J Criner; Zab Mosenifar; Frank C Sciurba; Barry J Make; Vincent Carey; Raúl San José Estépar; Alejandro Diaz; John J Reilly; Fernando J Martinez; George R Washko
Journal:  Chest       Date:  2009-05-01       Impact factor: 9.410

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  18 in total

1.  Evidence for Expanding Invasive Mediastinal Staging for Peripheral T1 Lung Tumors.

Authors:  Emily A DuComb; Benjamin A Tonelli; Ya Tuo; Bernard F Cole; Vitor Mori; Jason H T Bates; George R Washko; Raúl San José Estépar; C Matthew Kinsey
Journal:  Chest       Date:  2020-06-26       Impact factor: 9.410

2.  Equating quantitative emphysema measurements on different CT image reconstructions.

Authors:  Seth T Bartel; Andrew J Bierhals; Thomas K Pilgram; Cheng Hong; Kenneth B Schechtman; Susan H Conradi; David S Gierada
Journal:  Med Phys       Date:  2011-08       Impact factor: 4.071

3.  Accurate measurement of small airways on low-dose thoracic CT scans in smokers.

Authors:  Barbara A Lutey; Susan H Conradi; Jeffrey J Atkinson; Jie Zheng; Kenneth B Schechtman; Robert M Senior; David S Gierada
Journal:  Chest       Date:  2013-05       Impact factor: 9.410

4.  Scatter correction associated with dedicated dual-source CT hardware improves accuracy of lung air measures.

Authors:  Sean D Mobberley; Matthew K Fuld; Jered P Sieren; Andrew N Primak; Eric A Hoffman
Journal:  Acad Radiol       Date:  2013-11       Impact factor: 3.173

5.  Six-minute walk distance predictors, including CT scan measures, in the COPDGene cohort.

Authors:  Mehdi Rambod; Janos Porszasz; Barry J Make; James D Crapo; Richard Casaburi
Journal:  Chest       Date:  2011-09-29       Impact factor: 9.410

6.  Systems for lung volume standardization during static and dynamic MDCT-based quantitative assessment of pulmonary structure and function.

Authors:  Matthew K Fuld; Randall W Grout; Junfeng Guo; John H Morgan; Eric A Hoffman
Journal:  Acad Radiol       Date:  2012-05-01       Impact factor: 3.173

7.  Peripheral blood mononuclear cell gene expression in chronic obstructive pulmonary disease.

Authors:  Timothy M Bahr; Grant J Hughes; Michael Armstrong; Rick Reisdorph; Christopher D Coldren; Michael G Edwards; Christina Schnell; Ross Kedl; Daniel J LaFlamme; Nichole Reisdorph; Katerina J Kechris; Russell P Bowler
Journal:  Am J Respir Cell Mol Biol       Date:  2013-08       Impact factor: 6.914

8.  Very low-dose (0.15 mGy) chest CT protocols using the COPDGene 2 test object and a third-generation dual-source CT scanner with corresponding third-generation iterative reconstruction software.

Authors:  John D Newell; Matthew K Fuld; Thomas Allmendinger; Jered P Sieren; Kung-Sik Chan; Junfeng Guo; Eric A Hoffman
Journal:  Invest Radiol       Date:  2015-01       Impact factor: 6.016

Review 9.  Updates on the COPD gene list.

Authors:  Yohan Bossé
Journal:  Int J Chron Obstruct Pulmon Dis       Date:  2012-09-18

10.  Heterozygosity for E292V in ABCA3, lung function and COPD in 64,000 individuals.

Authors:  Marie Bækvad-Hansen; Børge G Nordestgaard; Morten Dahl
Journal:  Respir Res       Date:  2012-08-06
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