Literature DB >> 20519034

Novel genes for QTc interval. How much heritability is explained, and how much is left to find?

Yalda Jamshidi1, Ilja M Nolte, Timothy D Spector, Harold Snieder.   

Abstract

The corrected QT (QTc) interval is a complex quantitative trait, believed to be influenced by several genetic and environmental factors. It is a strong prognostic indicator of cardiovascular mortality in patients with and without cardiac disease. More than 700 mutations have been described in 12 genes (LQT1-LQT12) involved in congenital long QT syndrome. However, the heritability (genetic contribution) of QTc interval in the general population cannot be adequately explained by these long QT syndrome genes. In order to further investigate the genetic architecture underlying QTc interval in the general population, genome-wide association studies, in which up to one million single nucleotide polymorphisms are assayed in thousands of individuals, are now being employed and have already led to the discovery of variants in seven novel loci and five loci that are known to cause congenital long or short QT syndrome. Here we show that a combined risk score using 11 of these loci explains about 10% of the heritability of QTc. Additional discovery of both common and rare variants will yield further etiological insight and accelerate clinical applications.

Entities:  

Year:  2010        PMID: 20519034      PMCID: PMC2887079          DOI: 10.1186/gm156

Source DB:  PubMed          Journal:  Genome Med        ISSN: 1756-994X            Impact factor:   11.117


  48 in total

1.  Prevalence and prognostic significance of short QT interval in a middle-aged Finnish population.

Authors:  O Anttonen; M J Junttila; H Rissanen; A Reunanen; M Viitasalo; H V Huikuri
Journal:  Circulation       Date:  2007-08-06       Impact factor: 29.690

2.  How to interpret a genome-wide association study.

Authors:  Thomas A Pearson; Teri A Manolio
Journal:  JAMA       Date:  2008-03-19       Impact factor: 56.272

Review 3.  African genetic diversity: implications for human demographic history, modern human origins, and complex disease mapping.

Authors:  Michael C Campbell; Sarah A Tishkoff
Journal:  Annu Rev Genomics Hum Genet       Date:  2008       Impact factor: 8.929

4.  Common variation in NOS1AP and KCNH2 genes and QT interval duration in young adults. The Cardiovascular Risk in Young Finns Study.

Authors:  Olli T Raitakari; Jaana Blom-Nyholm; Tuomas A Koskinen; Mika Kähönen; Jorma S A Viikari; Terho Lehtimäki
Journal:  Ann Med       Date:  2009       Impact factor: 4.709

5.  Association of NOS1AP genetic variants with QT interval duration in families from the Diabetes Heart Study.

Authors:  Allison B Lehtinen; Christopher Newton-Cheh; Julie T Ziegler; Carl D Langefeld; Barry I Freedman; Kurt R Daniel; David M Herrington; Donald W Bowden
Journal:  Diabetes       Date:  2008-01-30       Impact factor: 9.461

6.  Ndrg4 is required for normal myocyte proliferation during early cardiac development in zebrafish.

Authors:  Xianghu Qu; Haibo Jia; Deborah M Garrity; Kevin Tompkins; Lorene Batts; Bruce Appel; Tao P Zhong; H Scott Baldwin
Journal:  Dev Biol       Date:  2008-03-06       Impact factor: 3.582

Review 7.  Common and rare variants in multifactorial susceptibility to common diseases.

Authors:  Walter Bodmer; Carolina Bonilla
Journal:  Nat Genet       Date:  2008-06       Impact factor: 38.330

8.  Common genetic variation in KCNH2 is associated with QT interval duration: the Framingham Heart Study.

Authors:  Christopher Newton-Cheh; Chao-Yu Guo; Martin G Larson; Stacy L Musone; Aarti Surti; Amy L Camargo; Jared A Drake; Emelia J Benjamin; Daniel Levy; Ralph B D'Agostino; Joel N Hirschhorn; Christopher J O'donnell
Journal:  Circulation       Date:  2007-08-20       Impact factor: 29.690

9.  Gender and effects of a common genetic variant in the NOS1 regulator NOS1AP on cardiac repolarization in 3761 individuals from two independent populations.

Authors:  Martin D Tobin; Mika Kähönen; Peter Braund; Tuomo Nieminen; Cother Hajat; Maciej Tomaszewski; Jari Viik; Rami Lehtinen; G Andre Ng; Peter W Macfarlane; Paul R Burton; Terho Lehtimäki; Nilesh J Samani
Journal:  Int J Epidemiol       Date:  2008-05-29       Impact factor: 7.196

10.  Newly identified genetic risk variants for celiac disease related to the immune response.

Authors:  Karen A Hunt; Alexandra Zhernakova; Graham Turner; Graham A R Heap; Lude Franke; Marcel Bruinenberg; Jihane Romanos; Lotte C Dinesen; Anthony W Ryan; Davinder Panesar; Rhian Gwilliam; Fumihiko Takeuchi; William M McLaren; Geoffrey K T Holmes; Peter D Howdle; Julian R F Walters; David S Sanders; Raymond J Playford; Gosia Trynka; Chris J J Mulder; M Luisa Mearin; Wieke H M Verbeek; Valerie Trimble; Fiona M Stevens; Colm O'Morain; Nicholas P Kennedy; Dermot Kelleher; Daniel J Pennington; David P Strachan; Wendy L McArdle; Charles A Mein; Martin C Wapenaar; Panos Deloukas; Ralph McGinnis; Ross McManus; Cisca Wijmenga; David A van Heel
Journal:  Nat Genet       Date:  2008-03-02       Impact factor: 38.330

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  7 in total

1.  Missing heritability: is the gap closing? An analysis of 32 complex traits in the Lifelines Cohort Study.

Authors:  Ilja M Nolte; Peter J van der Most; Behrooz Z Alizadeh; Paul Iw de Bakker; H Marike Boezen; Marcel Bruinenberg; Lude Franke; Pim van der Harst; Gerjan Navis; Dirkje S Postma; Marianne G Rots; Ronald P Stolk; Morris A Swertz; Bruce Hr Wolffenbuttel; Cisca Wijmenga; Harold Snieder
Journal:  Eur J Hum Genet       Date:  2017-04-12       Impact factor: 4.246

2.  Evidence of heterogeneity by race/ethnicity in genetic determinants of QT interval.

Authors:  Amanda A Seyerle; Alicia M Young; Janina M Jeff; Phillip E Melton; Neal W Jorgensen; Yi Lin; Cara L Carty; Ewa Deelman; Susan R Heckbert; Lucia A Hindorff; Rebecca D Jackson; Lisa W Martin; Peter M Okin; Marco V Perez; Bruce M Psaty; Elsayed Z Soliman; Eric A Whitsel; Kari E North; Sandra Laston; Charles Kooperberg; Christy L Avery
Journal:  Epidemiology       Date:  2014-11       Impact factor: 4.822

3.  Heritability in genetic heart disease: the role of genetic background.

Authors:  Joeri A Jansweijer; Karin Y van Spaendonck-Zwarts; Michael W T Tanck; J Peter van Tintelen; Imke Christiaans; Jasper van der Smagt; Alexa Vermeer; J Martijn Bos; Arthur J Moss; Heikki Swan; Sylvia G Priori; Annika Rydberg; Jacob Tfelt-Hansen; Michael J Ackerman; Iacopo Olivotto; Philippe Charron; Juan R Gimeno; Maarten van den Berg; Arthur A M Wilde; Yigal M Pinto
Journal:  Open Heart       Date:  2019-05-28

4.  Genetic analyses of the electrocardiographic QT interval and its components identify additional loci and pathways.

Authors:  William J Young; Najim Lahrouchi; Aaron Isaacs; ThuyVy Duong; Luisa Foco; Farah Ahmed; Jennifer A Brody; Reem Salman; Raymond Noordam; Jan-Walter Benjamins; Jeffrey Haessler; Leo-Pekka Lyytikäinen; Linda Repetto; Maria Pina Concas; Marten E van den Berg; Stefan Weiss; Antoine R Baldassari; Traci M Bartz; James P Cook; Daniel S Evans; Rebecca Freudling; Oliver Hines; Jonas L Isaksen; Honghuang Lin; Hao Mei; Arden Moscati; Martina Müller-Nurasyid; Casia Nursyifa; Yong Qian; Anne Richmond; Carolina Roselli; Kathleen A Ryan; Eduardo Tarazona-Santos; Sébastien Thériault; Stefan van Duijvenboden; Helen R Warren; Jie Yao; Dania Raza; Stefanie Aeschbacher; Gustav Ahlberg; Alvaro Alonso; Laura Andreasen; Joshua C Bis; Eric Boerwinkle; Archie Campbell; Eulalia Catamo; Massimiliano Cocca; Michael J Cutler; Dawood Darbar; Alessandro De Grandi; Antonio De Luca; Jun Ding; Christina Ellervik; Patrick T Ellinor; Stephan B Felix; Philippe Froguel; Christian Fuchsberger; Martin Gögele; Claus Graff; Mariaelisa Graff; Xiuqing Guo; Torben Hansen; Susan R Heckbert; Paul L Huang; Heikki V Huikuri; Nina Hutri-Kähönen; M Arfan Ikram; Rebecca D Jackson; Juhani Junttila; Maryam Kavousi; Jan A Kors; Thiago P Leal; Rozenn N Lemaitre; Henry J Lin; Lars Lind; Allan Linneberg; Simin Liu; Peter W MacFarlane; Massimo Mangino; Thomas Meitinger; Massimo Mezzavilla; Pashupati P Mishra; Rebecca N Mitchell; Nina Mononen; May E Montasser; Alanna C Morrison; Matthias Nauck; Victor Nauffal; Pau Navarro; Kjell Nikus; Guillaume Pare; Kristen K Patton; Giulia Pelliccione; Alan Pittman; David J Porteous; Peter P Pramstaller; Michael H Preuss; Olli T Raitakari; Alexander P Reiner; Antonio Luiz P Ribeiro; Kenneth M Rice; Lorenz Risch; David Schlessinger; Ulrich Schotten; Claudia Schurmann; Xia Shen; M Benjamin Shoemaker; Gianfranco Sinagra; Moritz F Sinner; Elsayed Z Soliman; Monika Stoll; Konstantin Strauch; Kirill Tarasov; Kent D Taylor; Andrew Tinker; Stella Trompet; André Uitterlinden; Uwe Völker; Henry Völzke; Melanie Waldenberger; Lu-Chen Weng; Eric A Whitsel; James G Wilson; Christy L Avery; David Conen; Adolfo Correa; Francesco Cucca; Marcus Dörr; Sina A Gharib; Giorgia Girotto; Niels Grarup; Caroline Hayward; Yalda Jamshidi; Marjo-Riitta Järvelin; J Wouter Jukema; Stefan Kääb; Mika Kähönen; Jørgen K Kanters; Charles Kooperberg; Terho Lehtimäki; Maria Fernanda Lima-Costa; Yongmei Liu; Ruth J F Loos; Steven A Lubitz; Dennis O Mook-Kanamori; Andrew P Morris; Jeffrey R O'Connell; Morten Salling Olesen; Michele Orini; Sandosh Padmanabhan; Cristian Pattaro; Annette Peters; Bruce M Psaty; Jerome I Rotter; Bruno Stricker; Pim van der Harst; Cornelia M van Duijn; Niek Verweij; James F Wilson; Dan E Arking; Julia Ramirez; Pier D Lambiase; Nona Sotoodehnia; Borbala Mifsud; Christopher Newton-Cheh; Patricia B Munroe
Journal:  Nat Commun       Date:  2022-09-01       Impact factor: 17.694

5.  AKAP9 is a genetic modifier of congenital long-QT syndrome type 1.

Authors:  Carin P de Villiers; Lize van der Merwe; Lia Crotti; Althea Goosen; Alfred L George; Peter J Schwartz; Paul A Brink; Johanna C Moolman-Smook; Valerie A Corfield
Journal:  Circ Cardiovasc Genet       Date:  2014-08-02

6.  QTc prolongation prior to angiography predicts poor outcome and associates significantly with lower left ventricular ejection fractions and higher left ventricular end-diastolic pressures.

Authors:  P van der Bijl; M Heradien; A Doubell; P Brink
Journal:  Cardiovasc J Afr       Date:  2012-11       Impact factor: 1.167

7.  Drug-gene interactions and the search for missing heritability: a cross-sectional pharmacogenomics study of the QT interval.

Authors:  C L Avery; C M Sitlani; D E Arking; D K Arnett; J C Bis; E Boerwinkle; B M Buckley; Y-D Ida Chen; A J M de Craen; M Eijgelsheim; D Enquobahrie; D S Evans; I Ford; M E Garcia; V Gudnason; T B Harris; S R Heckbert; H Hochner; A Hofman; W-C Hsueh; A Isaacs; J W Jukema; P Knekt; J A Kors; B P Krijthe; K Kristiansson; M Laaksonen; Y Liu; X Li; P W Macfarlane; C Newton-Cheh; M S Nieminen; B A Oostra; G M Peloso; K Porthan; K Rice; F F Rivadeneira; J I Rotter; V Salomaa; N Sattar; D S Siscovick; P E Slagboom; A V Smith; N Sotoodehnia; D J Stott; B H Stricker; T Stürmer; S Trompet; A G Uitterlinden; C van Duijn; R G J Westendorp; J C Witteman; E A Whitsel; B M Psaty
Journal:  Pharmacogenomics J       Date:  2013-03-05       Impact factor: 3.550

  7 in total

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