Literature DB >> 18593304

African genetic diversity: implications for human demographic history, modern human origins, and complex disease mapping.

Michael C Campbell1, Sarah A Tishkoff.   

Abstract

Comparative studies of ethnically diverse human populations, particularly in Africa, are important for reconstructing human evolutionary history and for understanding the genetic basis of phenotypic adaptation and complex disease. African populations are characterized by greater levels of genetic diversity, extensive population substructure, and less linkage disequilibrium (LD) among loci compared to non-African populations. Africans also possess a number of genetic adaptations that have evolved in response to diverse climates and diets, as well as exposure to infectious disease. This review summarizes patterns and the evolutionary origins of genetic diversity present in African populations, as well as their implications for the mapping of complex traits, including disease susceptibility.

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Year:  2008        PMID: 18593304      PMCID: PMC2953791          DOI: 10.1146/annurev.genom.9.081307.164258

Source DB:  PubMed          Journal:  Annu Rev Genomics Hum Genet        ISSN: 1527-8204            Impact factor:   8.929


  240 in total

1.  Linkage disequilibrium patterns vary substantially among populations.

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2.  The beta -globin recombinational hotspot reduces the effects of strong selection around HbC, a recently arisen mutation providing resistance to malaria.

Authors:  Elizabeth T Wood; Daryn A Stover; Montgomery Slatkin; Michael W Nachman; Michael F Hammer
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Review 4.  Population genetics models of common diseases.

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Journal:  Curr Opin Genet Dev       Date:  2006-10-19       Impact factor: 5.578

5.  Worldwide haplotype diversity and coding sequence variation at human bitter taste receptor loci.

Authors:  Unkyung Kim; Stephen Wooding; Dante Ricci; Lynn B Jorde; Dennis Drayna
Journal:  Hum Mutat       Date:  2005-09       Impact factor: 4.878

Review 6.  Archaic admixture in the human genome.

Authors:  Jeffrey D Wall; Michael F Hammer
Journal:  Curr Opin Genet Dev       Date:  2006-10-05       Impact factor: 5.578

Review 7.  African human diversity, origins and migrations.

Authors:  Floyd A Reed; Sarah A Tishkoff
Journal:  Curr Opin Genet Dev       Date:  2006-10-23       Impact factor: 5.578

8.  Microsatellite variation and evolution of human lactase persistence.

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Journal:  Hum Genet       Date:  2005-06-01       Impact factor: 4.132

Review 9.  Human taste genetics.

Authors:  Dennis Drayna
Journal:  Annu Rev Genomics Hum Genet       Date:  2005       Impact factor: 8.929

10.  Distribution of CCR2-64I and SDF1-3'A alleles and HIV status in 7 ethnic populations of Cameroon.

Authors:  Liying Ma; Michael Marmor; Ping Zhong; Leonard Ewane; Bing Su; Phillipe Nyambi
Journal:  J Acquir Immune Defic Syndr       Date:  2005-09-01       Impact factor: 3.731

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  290 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-04       Impact factor: 11.205

2.  Balancing immunity and tolerance: genetic footprint of natural selection in the transcriptional regulatory region of HLA-G.

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Journal:  Genes Immun       Date:  2014-11-13       Impact factor: 2.676

3.  VWF mutations and new sequence variations identified in healthy controls are more frequent in the African-American population.

Authors:  Daniel B Bellissimo; Pamela A Christopherson; Veronica H Flood; Joan Cox Gill; Kenneth D Friedman; Sandra L Haberichter; Amy D Shapiro; Thomas C Abshire; Cindy Leissinger; W Keith Hoots; Jeanne M Lusher; Margaret V Ragni; Robert R Montgomery
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4.  Using a "genomics tool" to develop disease prevention strategy in a low-income setting: lessons from the podoconiosis research project.

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5.  Colloquium paper: working toward a synthesis of archaeological, linguistic, and genetic data for inferring African population history.

Authors:  Laura B Scheinfeldt; Sameer Soi; Sarah A Tishkoff
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-05       Impact factor: 11.205

6.  Population structure of Aggarwals of north India as revealed by molecular markers.

Authors:  Vipin Gupta; Rajesh Khadgawat; Hon Keung Tony Ng; Satish Kumar; Vadlamudi Raghavendra Rao; Mohinder Pal Sachdeva
Journal:  Genet Test Mol Biomarkers       Date:  2010-10-28

7.  Human phylogeography and diversity.

Authors:  Alexander H Harcourt
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-19       Impact factor: 11.205

8.  Genetic mutations in African patients with atrial fibrillation: Rationale and design of the Study of Genetics of Atrial Fibrillation in an African Population (SIGNAL).

Authors:  Gerald S Bloomfield; Tecla M Temu; Constantine O Akwanalo; Peng-Sheng Chen; Wilfred Emonyi; Susan R Heckbert; Myra M Koech; Imran Manji; Changyu Shen; Matteo Vatta; Eric J Velazquez; Jennifer Wessel; Sylvester Kimaiyo; Thomas S Inui
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9.  Molecular characterisation of gastrointestinal stromal tumours in a South African population.

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Journal:  Oncol Lett       Date:  2012-11-05       Impact factor: 2.967

10.  Higher frequency of genetic variants conferring increased risk for ADRs for commonly used drugs treating cancer, AIDS and tuberculosis in persons of African descent.

Authors:  F Aminkeng; C J D Ross; S R Rassekh; L R Brunham; J Sistonen; M-P Dube; M Ibrahim; T B Nyambo; S A Omar; A Froment; J-M Bodo; S Tishkoff; B C Carleton; M R Hayden
Journal:  Pharmacogenomics J       Date:  2013-04-16       Impact factor: 3.550

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