Literature DB >> 20512521

On the design of filters for Fourier and oSVD-based deconvolution in bolus tracking perfusion MRI.

Peter Gall1, Philipp Emerich, Birgitte F Kjølby, Elias Kellner, Irina Mader, Valerij G Kiselev.   

Abstract

OBJECT: Bolus tracking perfusion evaluation relies on the deconvolution of a tracers concentration time-courses in an arterial and a tissue voxel following the tracer kinetic model. The object of this work is to propose a method to design a data-driven Tikhonov regularization filter in the Fourier domain and to compare it to the singular value decomposition (SVD)-based approaches using the mathematical equivalence of Fourier and circular SVD (oSVD).
MATERIALS AND METHODS: The adaptive filter is designed using Tikhonov regularization that depends on only one parameter. Using a simulation, such an optimal parameter that minimizes the sum of statistical and systematic error is determined as a function of the first moment difference between the tissue and the arterial curve and the contrast to noise ratios of the input data (CNR( a ) in arteries and CNR( t ) in tissue). The performance of the method is evaluated and compared to oSVD in simulations and measured data.
RESULTS: The proposed method yields a smaller flow underestimation especially for high flows when compared to the oSVD approach with constant threshold. However, this improvement comes to the price of an increased uncertainty of the flow values. The translation of the Tikhonov regularization parameter to an adaptive oSVD-threshold is in good agreement with the literature.
CONCLUSION: The proposed method is a comprehensive approach for the design of data-driven filters that can be easily adapted to specific needs.

Entities:  

Mesh:

Year:  2010        PMID: 20512521     DOI: 10.1007/s10334-010-0217-8

Source DB:  PubMed          Journal:  MAGMA        ISSN: 0968-5243            Impact factor:   2.310


  14 in total

1.  Cerebral blood flow measurement by dynamic contrast MRI using singular value decomposition with an adaptive threshold.

Authors:  H L Liu; Y Pu; Y Liu; L Nickerson; T Andrews; P T Fox; J H Gao
Journal:  Magn Reson Med       Date:  1999-07       Impact factor: 4.668

2.  On the theoretical basis of perfusion measurements by dynamic susceptibility contrast MRI.

Authors:  V G Kiselev
Journal:  Magn Reson Med       Date:  2001-12       Impact factor: 4.668

3.  Quantification of bolus-tracking MRI: Improved characterization of the tissue residue function using Tikhonov regularization.

Authors:  Fernando Calamante; David G Gadian; Alan Connelly
Journal:  Magn Reson Med       Date:  2003-12       Impact factor: 4.668

4.  Characterizing non-Gaussian diffusion by using generalized diffusion tensors.

Authors:  Chunlei Liu; Roland Bammer; Burak Acar; Michael E Moseley
Journal:  Magn Reson Med       Date:  2004-05       Impact factor: 4.668

5.  Defining a local arterial input function for perfusion MRI using independent component analysis.

Authors:  Fernando Calamante; Morten Mørup; Lars Kai Hansen
Journal:  Magn Reson Med       Date:  2004-10       Impact factor: 4.668

6.  Assessment of perfusion by dynamic contrast-enhanced imaging using a deconvolution approach based on regression and singular value decomposition.

Authors:  T S Koh; X Y Wu; L H Cheong; C C T Lim
Journal:  IEEE Trans Med Imaging       Date:  2004-12       Impact factor: 10.048

7.  Automatic selection of arterial input function using cluster analysis.

Authors:  Kim Mouridsen; Søren Christensen; Louise Gyldensted; Leif Ostergaard
Journal:  Magn Reson Med       Date:  2006-03       Impact factor: 4.668

8.  Extraction of the first bolus passage in dynamic susceptibility contrast perfusion measurements.

Authors:  Peter Gall; Irina Mader; Valerij G Kiselev
Journal:  MAGMA       Date:  2009-04-21       Impact factor: 2.310

9.  High resolution measurement of cerebral blood flow using intravascular tracer bolus passages. Part I: Mathematical approach and statistical analysis.

Authors:  L Ostergaard; R M Weisskoff; D A Chesler; C Gyldensted; B R Rosen
Journal:  Magn Reson Med       Date:  1996-11       Impact factor: 4.668

10.  Assessment of regional cerebral blood flow by dynamic susceptibility contrast MRI using different deconvolution techniques.

Authors:  R Wirestam; L Andersson; L Ostergaard; M Bolling; J P Aunola; A Lindgren; B Geijer; S Holtås; F Ståhlberg
Journal:  Magn Reson Med       Date:  2000-05       Impact factor: 4.668

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  5 in total

Review 1.  Real-time diffusion-perfusion mismatch analysis in acute stroke.

Authors:  Matus Straka; Gregory W Albers; Roland Bammer
Journal:  J Magn Reson Imaging       Date:  2010-11       Impact factor: 4.813

2.  Susceptibility-based analysis of dynamic gadolinium bolus perfusion MRI.

Authors:  David Bonekamp; Peter B Barker; Richard Leigh; Peter C M van Zijl; Xu Li
Journal:  Magn Reson Med       Date:  2014-02-25       Impact factor: 4.668

3.  Vessel size imaging reveals pathological changes of microvessel density and size in acute ischemia.

Authors:  Chao Xu; Wolf U H Schmidt; Kersten Villringer; Peter Brunecker; Valerij Kiselev; Peter Gall; Jochen B Fiebach
Journal:  J Cereb Blood Flow Metab       Date:  2011-04-06       Impact factor: 6.200

4.  Deconvolution-Based CT and MR Brain Perfusion Measurement: Theoretical Model Revisited and Practical Implementation Details.

Authors:  Andreas Fieselmann; Markus Kowarschik; Arundhuti Ganguly; Joachim Hornegger; Rebecca Fahrig
Journal:  Int J Biomed Imaging       Date:  2011-08-28

Review 5.  Perfusion magnetic resonance imaging: a comprehensive update on principles and techniques.

Authors:  Geon-Ho Jahng; Ka-Loh Li; Leif Ostergaard; Fernando Calamante
Journal:  Korean J Radiol       Date:  2014-09-12       Impact factor: 3.500

  5 in total

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