Literature DB >> 20511425

Quantitative real-time PCR assays for sensitive detection of Canada goose-specific fecal pollution in water sources.

B Fremaux1, T Boa, C K Yost.   

Abstract

Canada geese (Branta canadensis) are prevalent in North America and may contribute to fecal pollution of water systems where they congregate. This work provides two novel real-time PCR assays (CGOF1-Bac and CGOF2-Bac) allowing for the specific and sensitive detection of Bacteroides 16S rRNA gene markers present within Canada goose feces.

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Year:  2010        PMID： 20511425      PMCID： PMC2901712          DOI： 10.1128/AEM.00110-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  18 in total

1.  Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes.

Authors:  A E Bernhard; K G Field
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

2.  A PCR assay To discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA.

Authors:  A E Bernhard; K G Field
Journal:  Appl Environ Microbiol       Date:  2000-10       Impact factor: 4.792

3.  Survey of Campylobacter species, VTEC O157 and Salmonella species in Swedish wildlife.

Authors:  H Wahlström; E Tysén; E Olsson Engvall; B Brändström; E Eriksson; T Mörner; I Vågsholm
Journal:  Vet Rec       Date:  2003-07-19       Impact factor: 2.695

4.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

5.  Fecal shedding and antimicrobial susceptibility of selected bacterial pathogens and a survey of intestinal parasites in free-living waterfowl.

Authors:  D M Fallacara; C M Monahan; T Y Morishita; R F Wack
Journal:  Avian Dis       Date:  2001 Jan-Mar       Impact factor: 1.577

6.  Canada goose (Branta canadensis) droppings as a potential source of pathogenic bacteria.

Authors:  C J Feare; M F Sanders; R Blasco; J D Bishop
Journal:  J R Soc Promot Health       Date:  1999-09

7.  Microbial diversity and host-specific sequences of Canada goose feces.

Authors:  Jingrang Lu; Jorge W Santo Domingo; Stephen Hill; Thomas A Edge
Journal:  Appl Environ Microbiol       Date:  2009-07-24       Impact factor: 4.792

8.  Giardia sp. cysts and infectious Cryptosporidium parvum oocysts in the feces of migratory Canada geese (Branta canadensis).

Authors:  T K Graczyk; R Fayer; J M Trout; E J Lewis; C A Farley; I Sulaiman; A A Lal
Journal:  Appl Environ Microbiol       Date:  1998-07       Impact factor: 4.792

9.  Prevalence of Escherichia coli serogroups and human virulence factors in faeces of urban Canada geese (Branta canadensis).

Authors:  Heather Kullas; Matt Coles; Jack Rhyan; Larry Clark
Journal:  Int J Environ Health Res       Date:  2002-06       Impact factor: 3.411

Review 10.  Cryptosporidiosis: a brief literature review and update regarding Cryptosporidium in feces of Canada geese (Branta canadensis).

Authors:  Hailu Kassa; Brian J Harrington; Michael S Bisesi
Journal:  J Environ Health       Date:  2004-03       Impact factor: 1.179
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  5 in total

1.  Genetic markers for rapid PCR-based identification of gull, Canada goose, duck, and chicken fecal contamination in water.

Authors:  Hyatt C Green; Linda K Dick; Brent Gilpin; Mansour Samadpour; Katharine G Field
Journal:  Appl Environ Microbiol       Date:  2011-11-11       Impact factor: 4.792

2.  Development and evaluation of a quantitative PCR assay targeting sandhill crane (Grus canadensis) fecal pollution.

Authors:  Hodon Ryu; Jingrang Lu; Jason Vogel; Michael Elk; Felipe Chávez-Ramírez; Nicholas Ashbolt; Jorge Santo Domingo
Journal:  Appl Environ Microbiol       Date:  2012-04-06       Impact factor: 4.792

3.  Distribution and Differential Survival of Traditional and Alternative Indicators of Fecal Pollution at Freshwater Beaches.

Authors:  Danielle D Cloutier; Sandra L McLellan
Journal:  Appl Environ Microbiol       Date:  2017-02-01       Impact factor: 4.792

4.  Coherence among different microbial source tracking markers in a small agricultural stream with or without livestock exclusion practices.

Authors:  Graham Wilkes; Julie Brassard; Thomas A Edge; Victor Gannon; Cassandra C Jokinen; Tineke H Jones; Romain Marti; Norman F Neumann; Norma J Ruecker; Mark Sunohara; Edward Topp; David R Lapen
Journal:  Appl Environ Microbiol       Date:  2013-08-02       Impact factor: 4.792

5.  Human-Driven Microbiological Contamination of Benthic and Hyporheic Sediments of an Intermittent Peri-Urban River Assessed from MST and 16S rRNA Genetic Structure Analyses.

Authors:  Romain Marti; Sébastien Ribun; Jean-Baptiste Aubin; Céline Colinon; Stéphanie Petit; Laurence Marjolet; Michèle Gourmelon; Laurent Schmitt; Pascal Breil; Marylise Cottet; Benoit Cournoyer
Journal:  Front Microbiol       Date:  2017-01-24       Impact factor: 5.640
  5 in total

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