| Literature DB >> 20497390 |
Toru Watanabe1, Timothy A Bartrand, Mark H Weir, Tatsuo Omura, Charles N Haas.
Abstract
In order to develop a dose-response model for SARS coronavirus (SARS-CoV), the pooled data sets for infection of transgenic mice susceptible to SARS-CoV and infection of mice with murine hepatitis virus strain 1, which may be a clinically relevant model of SARS, were fit to beta-Poisson and exponential models with the maximum likelihood method. The exponential model (k= 4.1 x l0(2)) could describe the dose-response relationship of the pooled data sets. The beta-Poisson model did not provide a statistically significant improvement in fit. With the exponential model, the infectivity of SARS-CoV was calculated and compared with those of other coronaviruses. The does of SARS-CoV corresponding to 10% and 50% responses (illness) were estimated at 43 and 280 PFU, respectively. Its estimated infectivity was comparable to that of HCoV-229E, known as an agent of human common cold, and also similar to those of some animal coronaviruses belonging to the same genetic group. Moreover, the exponential model was applied to the analysis of the epidemiological data of SARS outbreak that occurred at an apartment complex in Hong Kong in 2003. The estimated dose of SARS-CoV for apartment residents during the outbreak, which was back-calculated from the reported number of cases, ranged from 16 to 160 PFU/person, depending on the floor. The exponential model developed here is the sole dose-response model for SARS-CoV at the present and would enable us to understand the possibility for reemergence of SARS.Entities:
Mesh:
Year: 2010 PMID: 20497390 PMCID: PMC7169223 DOI: 10.1111/j.1539-6924.2010.01427.x
Source DB: PubMed Journal: Risk Anal ISSN: 0272-4332 Impact factor: 4.000
Data Sets on Dose‐Response Relationship for Coronavirus Infection via Intranasal Route*
| No. | Virus | Genetic Group | Host | Reported Symptom | Number of Doses | Endpoint of Response | Reference | |
|---|---|---|---|---|---|---|---|---|
| Animal | Age | |||||||
| 1 | rSARS‐CoV** | 2 | tgMicet† | ? | R,CNS | 4 (1††) | Death |
|
| 2 | MHV‐1 | 2 | Mice | 6 to 8 weeks | R | 4(2) | Death |
|
| 3 | HCoV‐229E | 1 | Humans | 18 to 50 years | R | 4(4) | Illness (Cold) |
|
| 4 | MHV‐S | 2 | Mice | 3 days | CNS,H | 4(1) | Death |
|
| 5 | MHV‐S | 2 | Mice | 1 week | CNS,H | 4(1) | Death |
|
| 6 | MHV‐S | 2 | Mice | 2 weeks | CNS,H | 4(1) | Death |
|
| 7 | MHV‐2 | 2 | Mice | 3 weeks | H | 3(0) | Death |
|
| 8 | MHV‐2 | 2 | Mice | 4 weeks | H | 3(0) | Death |
|
| 9 | HEV‐67N | 2 | Mice | 1 week | CNS | 4(1) | Death |
|
| 10 | HEV‐67N | 2 | Mice | 4 weeks | CNS | 5(1) | Death |
|
| 11 | HEV‐67N | 2 | Mice | 8 weeks | CNS | 5(1) | Death |
|
| 12 | HEV‐67N | 2 | Rats | 1 week | CNS | 4(1) | Death |
|
| 13 | HEV‐67N | 2 | Rats | 4 weeks | CNS | 3(1) | Death |
|
| 14 | HEV‐67N | 2 | Rats | 8 weeks | CNS | 3(2) | Death |
|
| 15 | IBVA‐5968 | 3 | Chicks | 9 weeks | R,K | 6(4) | Death |
|
R = respiratory; CNS = central nervous system; H = hepatitis; K = kidney damage.
*Only data set 15 was obtained by intratracheal inoculation.
**Recombinant SARS‐CoV.
†Transgenic mice expressing the SARS‐CoV receptor.
††Number of dose points corresponding to other than 0 or 100% response.
Parameters and Likelihood of Dose‐Response Models Fitted to Data Sets on Coronavirus Infection
| No. | Virus | Host | Beta‐Poisson(BP) | Exponential (EXP) | Better Fit Model** | Unit of Dose | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Species | Age | ln α | ln | Deviance |
| ln | Deviance |
| ||||
| 1 | rSARS‐CoV | tgMice | ? | ‐* | ‐ | ‐ | ‐ | 5.82 | 0.97 | 0.81 | PFU | |
| 2 | MHV‐1 | Mice | 6 to 8 weeks | 1.23 | 5.71 | 0.54 | 0.76 | 6.15 | 0.61 | 0.89 | EXP | PFU |
| p† | SARS‐CoV | Mice | ? | 6.50 | 5.64 | 1.75 | 0.94 | 6.01 | 1.75 | 0.97 | EXP | PFU |
| 3 | HCoV‐229E | Humans | 18 to 50 years | −0.21 | 2.38 | 1.42 | 0.49 | 2.92 | 2.31 | 0.51 | EXP | TCD50 |
| 4 | MHV‐S | Mice | 3 days | ‐ | ‐ | ‐ | ‐ | 6.32 | 0.56 | 0.91 | PFU | |
| 5 | MHV‐S | Mice | 1 week | ‐ | ‐ | ‐ | ‐ | 8.62 | 0.56 | 0.91 | PFU | |
| 6 | MHV‐S | Mice | 2 weeks | ‐ | ‐ | ‐ | ‐ | 13.6 | 0.24 | 0.97 | PFU | |
| 7 | MHV‐2 | Mice | 3 weeks | (No death among 5 mice at doses from 7 × 102 to 7 × 104) | PFU | |||||||
| 8 | MHV‐2 | Mice | 4 weeks | (No death among 5 mice at doses from 6 × 103 to 6 × 105) | PFU | |||||||
| 9 | HEV‐67N | Mice | 1 week | ‐ | ‐ | ‐ | ‐ | 2.39 | 0†† | PFU | ||
| 10 | HEV‐67N | Mice | 4 weeks | ‐ | ‐ | ‐ | ‐ | 7.62 | 0.62 | 0.96 | PFU | |
| 11 | HEV‐67N | Mice | 8 weeks | ‐ | ‐ | ‐ | ‐ | 7.62 | 0.62 | 0.96 | PFU | |
| 12 | HEV‐67N | Rats | 1 week | ‐ | ‐ | ‐ | ‐ | 3.08 | 0†† | PFU | ||
| 13 | HEV‐67N | Rats | 4 weeks | ‐ | ‐ | ‐ | ‐ | 8.66 | 0.54 | 0.76 | PFU | |
| 14 | HEV‐67N | Rats | 8 weeks | −1.04 | 7.42 | 1.97 | 0.16 | 9.34 | 6.36 | 0.04 | BP | PFU |
| 15 | IBVA‐5968 | Chicks | 9 weeks | −5.11 | 109 | 2.93 | 0.57 | 11.4 | 26.6 | <0.01 | BP | CD50 |
*Beta‐Poisson model was not fitted to data sets including less than two dose points corresponding to other than 0 or 100% response.
**Beta‐Poisson model was employed if it provided a significant improvement of fit (p > 0.05) rather than exponential model.
†Data set p pooled data sets 1 and 2.
††Zero deviance means that all data were on the model.
Figure 1Exponential dose‐response model fitted to the pooled data sets for SARS‐CoV.
Figure 2Doses (ID10 and ID50) of SARS‐CoV and other coronaviruses corresponding to 10 and 50% response. Error bars indicate 95% confident intervals.
Estimated Dose of SARS‐CoV for Residents in Amoy Gardens During the Outbreak in 2003
| (a) Estimation Based on the Assumed Number of Residents | ||||
|---|---|---|---|---|
| Floor (Level) | Number of Reported Cases | Number of Residents* | Attack Rate | Estimated Dose (PFU) |
| Lower (4–13) | 12 | 320 | 0.038 | 16 |
| Middle (14–23) | 46 | 320 | 0.144 | 63 |
| Upper (24–36) | 41 | 416 | 0.099 | 42 |
| Overall | 99 | 1056 | 0.094 | 40 |
*Assumed that each flat has four residents.
**Number of flats where at least one case was reported.
APPENDIX: DATA SETS FOR MODEL DEVELOPMENT
| No. | Virus | Host Animal | Host Age | Dose | Tested | Positive | Negative |
|---|---|---|---|---|---|---|---|
| 1 | rSARS‐CoV | tgMice | ? | 240 | 3 | 1 | 2 |
| 800 | 3 | 3 | 0 | ||||
| 2,400 | 2 | 2 | 0 | ||||
| 12,000 | 6 | 6 | 0 | ||||
| 2 | MHV‐1 | Mice | 6 to 8 weeks | 5 | 5 | 0 | 5 |
| 50 | 5 | 1 | 4 | ||||
| 500 | 5 | 3 | 2 | ||||
| 5,000 | 5 | 5 | 0 | ||||
| 3 | HCoV‐229E | Humans | 18 to 50 years | 4 | 5 | 2 | 3 |
| 5 | 6 | 1 | 5 | ||||
| 16 | 9 | 6 | 3 | ||||
| 31 | 6 | 4 | 2 | ||||
| 4 | MHV‐S | Mice | 3 days | 20 | 4 | 0 | 4 |
| 200 | 4 | 1 | 3 | ||||
| 2,000 | 4 | 4 | 0 | ||||
| 20,000 | 4 | 4 | 0 | ||||
| 200,000 | 4 | 4 | 0 | ||||
| 5 | MHV‐S | Mice | 1 week | 200 | 4 | 0 | 4 |
| 2,000 | 4 | 1 | 3 | ||||
| 20,000 | 4 | 4 | 0 | ||||
| 20,0000 | 4 | 4 | 0 | ||||
| 6 | MHV‐S | Mice | 2 weeks | 2,000 | 4 | 0 | 4 |
| 20,000 | 4 | 0 | 4 | ||||
| 200,000 | 4 | 1 | 3 | ||||
| 7 | MHV‐2 | Mice | 3 weeks | 700 | 5 | 0 | 5 |
| 7,000 | 5 | 0 | 5 | ||||
| 70,000 | 5 | 0 | 5 | ||||
| 8 | MHV‐2 | Mice | 4 weeks | 6,000 | 5 | 0 | 5 |
| 60,000 | 4 | 0 | 4 | ||||
| 600,000 | 4 | 0 | 4 | ||||
| 9 | HEV‐67N | Mice | 1 week | 10 | 5 | 3 | 2 |
| 100 | 5 | 5 | 0 | ||||
| 1,000 | 5 | 5 | 0 | ||||
| 10,000 | 5 | 5 | 0 | ||||
| 10 | HEV‐67N | Mice | 4 weeks | 10 | 5 | 0 | 5 |
| 100 | 5 | 0 | 5 | ||||
| 1,000 | 5 | 2 | 3 | ||||
| 10,000 | 5 | 5 | 0 | ||||
| 100,000 | 5 | 5 | 0 | ||||
| 11 | HEV‐67N | Mice | 8 weeks | 10 | 5 | 0 | 5 |
| 100 | 5 | 0 | 5 | ||||
| 1,000 | 5 | 2 | 3 | ||||
| 10,000 | 5 | 5 | 0 | ||||
| 100,000 | 5 | 5 | 0 | ||||
| 12 | HEV‐67N | Rats | 1 week | 20 | 5 | 3 | 2 |
| 200 | 5 | 5 | 0 | ||||
| 2,000 | 5 | 5 | 0 | ||||
| 200,000 | 5 | 5 | 0 | ||||
| 13 | HEV‐67N | Rats | 4 weeks | 2,000 | 5 | 1 | 4 |
| 20,000 | 5 | 5 | 0 | ||||
| 200,000 | 5 | 5 | 0 | ||||
| 14 | HEV‐67N | Rats | 8 weeks | 2,000 | 5 | 3 | 2 |
| 20,000 | 5 | 3 | 2 | ||||
| 200,000 | 5 | 5 | 0 | ||||
| 15 | IBVA‐5968 | Chicks | 9 weeks | 0.32 | 11 | 0 | 11 |
| 3.2 | 11 | 1 | 10 | ||||
| 32 | 11 | 1 | 10 | ||||
| 320 | 11 | 0 | 11 | ||||
| 3,200 | 11 | 1 | 10 | ||||
| 32,000 | 11 | 1 | 10 |