Literature DB >> 20495666

Formation of an Amine-Water Cyclic Pentamer: A New Type of Water Cluster in a Polyazacryptand.

Musabbir A Saeed1, Bryan M Wong, Frank R Fronczek, Ramaiyer Venkatraman, Md Alamgir Hossain.   

Abstract

Structural analysis of an adduct of a thiophene-based cryptand with tosylic acid shows the formation of a hybrid amine-water cyclic pentamer composed of four water molecules and one protonated amine in the charged hydrophobic cavity. The bulky tosylate groups remain outside the cavity, making the ligand favorable for hosting water molecules. Ab initio calculations based on density functional theory (DFT) confirm that the hybrid amine-water pentamer is stabilized inside the hydrophobic cavity of the cryptand.

Entities:  

Year:  2010        PMID: 20495666      PMCID: PMC2873190          DOI: 10.1021/cg100161a

Source DB:  PubMed          Journal:  Cryst Growth Des        ISSN: 1528-7483            Impact factor:   4.076


  31 in total

1.  Protein side-chain motion and hydration in proton-transfer pathways. Results for cytochrome p450cam.

Authors:  Srabani Taraphder; Gerhard Hummer
Journal:  J Am Chem Soc       Date:  2003-04-02       Impact factor: 15.419

2.  Formation of two-dimensional supramolecular icelike layer containing (H2O)12 rings.

Authors:  Bao-Qing Ma; Hao-Ling Sun; Song Gao
Journal:  Angew Chem Int Ed Engl       Date:  2004-03-05       Impact factor: 15.336

3.  Cyclic water pentamer in a tape-like structure.

Authors:  Bao-Qing Ma; Hao-Ling Sun; Song Gao
Journal:  Chem Commun (Camb)       Date:  2004-08-20       Impact factor: 6.222

4.  Sequential proton transfer through water bridges in acid-base reactions.

Authors:  Omar F Mohammed; Dina Pines; Jens Dreyer; Ehud Pines; Erik T J Nibbering
Journal:  Science       Date:  2005-10-07       Impact factor: 47.728

5.  Spectral signatures of hydrated proton vibrations in water clusters.

Authors:  Jeffrey M Headrick; Eric G Diken; Richard S Walters; Nathan I Hammer; Richard A Christie; Jun Cui; Evgeniy M Myshakin; Michael A Duncan; Mark A Johnson; Kenneth D Jordan
Journal:  Science       Date:  2005-06-17       Impact factor: 47.728

6.  Proton transfer in ionic water clusters.

Authors:  Zheng Sun; Chi-Kit Siu; O Petru Balaj; Mirko Gruber; Vladimir E Bondybey; Martin K Beyer
Journal:  Angew Chem Int Ed Engl       Date:  2006-06-12       Impact factor: 15.336

7.  Multicoefficient extrapolated density functional theory studies of pi...pi interactions: the benzene dimer.

Authors:  Yan Zhao; Donald G Truhlar
Journal:  J Phys Chem A       Date:  2005-05-19       Impact factor: 2.781

8.  Peptide binding in OppA, the crystal structures of the periplasmic oligopeptide binding protein in the unliganded form and in complex with lysyllysine.

Authors:  S H Sleigh; J R Tame; E J Dodson; A J Wilkinson
Journal:  Biochemistry       Date:  1997-08-12       Impact factor: 3.162

Review 9.  Water in nonpolar confinement: from nanotubes to proteins and beyond.

Authors:  Jayendran C Rasaiah; Shekhar Garde; Gerhard Hummer
Journal:  Annu Rev Phys Chem       Date:  2008       Impact factor: 12.703

10.  Assessment of the accuracy of density functionals for prediction of relative energies and geometries of low-lying isomers of water hexamers.

Authors:  Erin E Dahlke; Ryan M Olson; Hannah R Leverentz; Donald G Truhlar
Journal:  J Phys Chem A       Date:  2008-04-05       Impact factor: 2.781

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  7 in total

1.  Experimental and Theoretical Aspects of Anion Complexes with a Thiophene-Based Cryptand.

Authors:  Syed A Haque; Musabbir A Saeed; Afsana Jahan; Jing Wang; Jerzy Leszczynski; Md Alamgir Hossain
Journal:  Comments Mod Chem A Comments Inorg Chem       Date:  2016-02-28       Impact factor: 4.533

2.  Solution and structural binding studies of phosphate with thiophene-based azamacrocycles.

Authors:  Syed A Haque; Rainier S Berkley; Frank R Fronczek; Md Alamgir Hossain
Journal:  Inorg Chem Commun       Date:  2016-05-27       Impact factor: 2.495

3.  Anion Cluster: Assembly of Dihydrogen Phosphates for the Formation of a Cyclic Anion Octamer.

Authors:  Md Alamgir Hossain; Muhammet Işıklan; Avijit Pramanik; Musabbir A Saeed; Frank R Fronczek
Journal:  Cryst Growth Des       Date:  2012-02-01       Impact factor: 4.076

4.  A C Symmetric Nitrate Complex with a Thiophene-Based Tripodal Receptor.

Authors:  Muhammet Işiklan; Musabbir A Saeed; Avijit Pramanik; Bryan M Wong; Frank R Fronczek; Alamgir Hossain
Journal:  Cryst Growth Des       Date:  2011-04-06       Impact factor: 4.076

5.  A self-assembled fluoride-water cyclic cluster of [F(H2O)]4(4-) in a molecular box.

Authors:  Md Alamgir Hossain; Musabbir A Saeed; Avijit Pramanik; Bryan M Wong; Syed A Haque; Douglas R Powell
Journal:  J Am Chem Soc       Date:  2012-07-13       Impact factor: 15.419

6.  Electronic Properties of Vinylene-Linked Heterocyclic Conducting Polymers: Predictive Design and Rational Guidance from DFT Calculations.

Authors:  Bryan M Wong; Joseph G Cordaro
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2011-07-13       Impact factor: 4.126

7.  Study on the Photoluminescent and Thermal Properties of Zinc Complexes with a N₆O₄ Macrocyclic Ligand.

Authors:  Xingyong Xue; Qijun Wang; Fusen Mai; Xing Liang; Yichen Huang; Jiahe Li; Yanling Zhou; Dengfeng Yang; Zhen Ma
Journal:  Molecules       Date:  2018-07-16       Impact factor: 4.411

  7 in total

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