Literature DB >> 20495053

Searching for mesophilic Thermotogales bacteria: "mesotogas" in the wild.

Camilla L Nesbø1, Rajkumari Kumaraswamy, Marlena Dlutek, W Ford Doolittle, Julia Foght.   

Abstract

All cultivated Thermotogales are thermophiles or hyperthermophiles. However, optimized 16S rRNA primers successfully amplified Thermotogales sequences from temperate hydrocarbon-impacted sites, mesothermic oil reservoirs, and enrichment cultures incubated at <46 degrees C. We conclude that distinct Thermotogales lineages commonly inhabit low-temperature environments but may be underreported, likely due to "universal" 16S rRNA gene primer bias.

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Year:  2010        PMID: 20495053      PMCID: PMC2901743          DOI: 10.1128/AEM.02846-09

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  8 in total

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2.  Mature fine tailings from oil sands processing harbour diverse methanogenic communities.

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3.  RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees.

Authors:  A Stamatakis; T Ludwig; H Meier
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4.  Evidence for existence of "mesotogas," members of the order Thermotogales adapted to low-temperature environments.

Authors:  Camilla L Nesbø; Marlena Dlutek; Olga Zhaxybayeva; W Ford Doolittle
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

5.  Use of 16S rRNA and rpoB genes as molecular markers for microbial ecology studies.

Authors:  Rebecca J Case; Yan Boucher; Ingela Dahllöf; Carola Holmström; W Ford Doolittle; Staffan Kjelleberg
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6.  Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge.

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7.  A rapid bootstrap algorithm for the RAxML Web servers.

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8.  Kosmotoga olearia gen. nov., sp. nov., a thermophilic, anaerobic heterotroph isolated from an oil production fluid.

Authors:  Jonathan L Dipippo; Camilla L Nesbø; Håkon Dahle; W Ford Doolittle; Nils-Kåre Birkland; Kenneth M Noll
Journal:  Int J Syst Evol Microbiol       Date:  2009-07-30       Impact factor: 2.747

  8 in total
  14 in total

1.  Evolution of temperature optimum in Thermotogaceae and the prediction of trait values of uncultured organisms.

Authors:  Håkon Dahle; Bjarte Hannisdal; Bjørn Olav Steinsbu; Hege Ommedal; Jørn Einen; Sigmund Jensen; Oyvind Larsen; Lise Ovreås; Svein Norland
Journal:  Extremophiles       Date:  2011-06-03       Impact factor: 2.395

2.  Phylogenetic analysis of the microbial community in hypersaline petroleum produced water from the Campos Basin.

Authors:  Francine Piubeli; Matthew J Grossman; Fabiana Fantinatti-Garboggini; Lucia R Durrant
Journal:  Environ Sci Pollut Res Int       Date:  2014-06-13       Impact factor: 4.223

3.  Extreme Thermophiles: Moving beyond single-enzyme biocatalysis.

Authors:  Andrew D Frock; Robert M Kelly
Journal:  Curr Opin Chem Eng       Date:  2012-11-12       Impact factor: 5.163

4.  Mesotoga prima gen. nov., sp. nov., the first described mesophilic species of the Thermotogales.

Authors:  Camilla L Nesbø; Danielle M Bradnan; Abigail Adebusuyi; Marlena Dlutek; Amanda K Petrus; Julia Foght; W Ford Doolittle; Kenneth M Noll
Journal:  Extremophiles       Date:  2012-03-13       Impact factor: 2.395

5.  The emergence and early evolution of biological carbon-fixation.

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Review 6.  Anaerobic thermophiles.

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7.  The genome organization of Thermotoga maritima reflects its lifestyle.

Authors:  Haythem Latif; Joshua A Lerman; Vasiliy A Portnoy; Yekaterina Tarasova; Harish Nagarajan; Alexandra C Schrimpe-Rutledge; Richard D Smith; Joshua N Adkins; Dae-Hee Lee; Yu Qiu; Karsten Zengler
Journal:  PLoS Genet       Date:  2013-04-25       Impact factor: 5.917

8.  Genome sequence of the mesophilic Thermotogales bacterium Mesotoga prima MesG1.Ag.4.2 reveals the largest Thermotogales genome to date.

Authors:  Olga Zhaxybayeva; Kristen S Swithers; Julia Foght; Anna G Green; David Bruce; Chris Detter; Shunsheng Han; Hazuki Teshima; James Han; Tanja Woyke; Sam Pitluck; Matt Nolan; Natalia Ivanova; Amrita Pati; Miriam L Land; Marlena Dlutek; W Ford Doolittle; Kenneth M Noll; Camilla L Nesbø
Journal:  Genome Biol Evol       Date:  2012-07-12       Impact factor: 3.416

9.  DNA-SIP reveals that Syntrophaceae play an important role in methanogenic hexadecane degradation.

Authors:  Lei Cheng; Chen Ding; Qiang Li; Qiao He; Li-Rong Dai; Hui Zhang
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10.  Draft Genome Sequences of Kosmotoga sp. Strain DU53 and Kosmotoga arenicorallina S304.

Authors:  Stephen M J Pollo; Rhianna Charchuk; Camilla L Nesbø
Journal:  Genome Announc       Date:  2016-06-16
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