Literature DB >> 20489179

Strong synaptic transmission impact by copy number variations in schizophrenia.

Joseph T Glessner1, Muredach P Reilly, Cecilia E Kim, Nagahide Takahashi, Anthony Albano, Cuiping Hou, Jonathan P Bradfield, Haitao Zhang, Patrick M A Sleiman, James H Flory, Marcin Imielinski, Edward C Frackelton, Rosetta Chiavacci, Kelly A Thomas, Maria Garris, Frederick G Otieno, Michael Davidson, Mark Weiser, Abraham Reichenberg, Kenneth L Davis, Joseph I Friedman, Thomas P Cappola, Kenneth B Margulies, Daniel J Rader, Struan F A Grant, Joseph D Buxbaum, Raquel E Gur, Hakon Hakonarson.   

Abstract

Schizophrenia is a psychiatric disorder with onset in late adolescence and unclear etiology characterized by both positive and negative symptoms, as well as cognitive deficits. To identify copy number variations (CNVs) that increase the risk of schizophrenia, we performed a whole-genome CNV analysis on a cohort of 977 schizophrenia cases and 2,000 healthy adults of European ancestry who were genotyped with 1.7 million probes. Positive findings were evaluated in an independent cohort of 758 schizophrenia cases and 1,485 controls. The Gene Ontology synaptic transmission family of genes was notably enriched for CNVs in the cases (P = 1.5 x 10(-7)). Among these, CACNA1B and DOC2A, both calcium-signaling genes responsible for neuronal excitation, were deleted in 16 cases and duplicated in 10 cases, respectively. In addition, RET and RIT2, both ras-related genes important for neural crest development, were significantly affected by CNVs. RET deletion was exclusive to seven cases, and RIT2 deletions were overrepresented common variant CNVs in the schizophrenia cases. Our results suggest that novel variations involving the processes of synaptic transmission contribute to the genetic susceptibility of schizophrenia.

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Year:  2010        PMID: 20489179      PMCID: PMC2890845          DOI: 10.1073/pnas.1000274107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  56 in total

Review 1.  Diagnostic criteria for schizophrenia and related disorders: options for DSM-IV.

Authors:  M Flaum; N C Andreasen
Journal:  Schizophr Bull       Date:  1991       Impact factor: 9.306

2.  New models of collaboration in genome-wide association studies: the Genetic Association Information Network.

Authors:  Teri A Manolio; Laura Lyman Rodriguez; Lisa Brooks; Gonçalo Abecasis; Dennis Ballinger; Mark Daly; Peter Donnelly; Stephen V Faraone; Kelly Frazer; Stacey Gabriel; Pablo Gejman; Alan Guttmacher; Emily L Harris; Thomas Insel; John R Kelsoe; Eric Lander; Norma McCowin; Matthew D Mailman; Elizabeth Nabel; James Ostell; Elizabeth Pugh; Stephen Sherry; Patrick F Sullivan; John F Thompson; James Warram; David Wholley; Patrice M Milos; Francis S Collins
Journal:  Nat Genet       Date:  2007-09       Impact factor: 38.330

3.  Runs of homozygosity reveal highly penetrant recessive loci in schizophrenia.

Authors:  Todd Lencz; Christophe Lambert; Pamela DeRosse; Katherine E Burdick; T Vance Morgan; John M Kane; Raju Kucherlapati; Anil K Malhotra
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-05       Impact factor: 11.205

4.  PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data.

Authors:  Kai Wang; Mingyao Li; Dexter Hadley; Rui Liu; Joseph Glessner; Struan F A Grant; Hakon Hakonarson; Maja Bucan
Journal:  Genome Res       Date:  2007-10-05       Impact factor: 9.043

5.  Mind the GAP, Rho, Rab and GDI.

Authors:  S E Antonarakis; L Van Aelst
Journal:  Nat Genet       Date:  1998-06       Impact factor: 38.330

Review 6.  Ca(2+)-dependent routes to Ras: mechanisms for neuronal survival, differentiation, and plasticity?

Authors:  S Finkbeiner; M E Greenberg
Journal:  Neuron       Date:  1996-02       Impact factor: 17.173

7.  Prevalence and diagnosis of schizophrenia based on register, case record and interview data in an isolated Finnish birth cohort born 1940-1969.

Authors:  Ritva Arajärvi; Jaana Suvisaari; Jaana Suokas; Marjut Schreck; Jari Haukka; Jukka Hintikka; Timo Partonen; Jouko Lönnqvist
Journal:  Soc Psychiatry Psychiatr Epidemiol       Date:  2005-09-27       Impact factor: 4.328

8.  Calcium activation of Ras mediated by neuronal exchange factor Ras-GRF.

Authors:  C L Farnsworth; N W Freshney; L B Rosen; A Ghosh; M E Greenberg; L A Feig
Journal:  Nature       Date:  1995-08-10       Impact factor: 49.962

9.  Studies of the c-Harvey-Ras gene in psychiatric disorders.

Authors:  D E Comings; S Wu; C Chiu; D Muhleman; J Sverd
Journal:  Psychiatry Res       Date:  1996-06-26       Impact factor: 3.222

10.  Mitochondrial dysfunction in schizophrenia: evidence for compromised brain metabolism and oxidative stress.

Authors:  S Prabakaran; J E Swatton; M M Ryan; S J Huffaker; J T-J Huang; J L Griffin; M Wayland; T Freeman; F Dudbridge; K S Lilley; N A Karp; S Hester; D Tkachev; M L Mimmack; R H Yolken; M J Webster; E F Torrey; S Bahn
Journal:  Mol Psychiatry       Date:  2004-07       Impact factor: 15.992

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  98 in total

1.  SynaptomeDB: an ontology-based knowledgebase for synaptic genes.

Authors:  Mehdi Pirooznia; Tao Wang; Dimitrios Avramopoulos; David Valle; Gareth Thomas; Richard L Huganir; Fernando S Goes; James B Potash; Peter P Zandi
Journal:  Bioinformatics       Date:  2012-01-27       Impact factor: 6.937

2.  The plasma membrane-associated GTPase Rin interacts with the dopamine transporter and is required for protein kinase C-regulated dopamine transporter trafficking.

Authors:  Deanna M Navaroli; Zachary H Stevens; Zeljko Uzelac; Luke Gabriel; Michael J King; Lawrence M Lifshitz; Harald H Sitte; Haley E Melikian
Journal:  J Neurosci       Date:  2011-09-28       Impact factor: 6.167

3.  Large common deletions associate with mortality at old age.

Authors:  Maris Kuningas; Karol Estrada; Yi-Hsiang Hsu; Kannabiran Nandakumar; André G Uitterlinden; Kathryn L Lunetta; Cornelia M van Duijn; David Karasik; Albert Hofman; Joanne Murabito; Fernando Rivadeneira; Douglas P Kiel; Henning Tiemeier
Journal:  Hum Mol Genet       Date:  2011-08-11       Impact factor: 6.150

Review 4.  The impact of genomics on pediatric research and medicine.

Authors:  John J Connolly; Hakon Hakonarson
Journal:  Pediatrics       Date:  2012-05-07       Impact factor: 7.124

5.  The human RIT2 core promoter short tandem repeat predominant allele is species-specific in length: a selective advantage for human evolution?

Authors:  Babak Emamalizadeh; Abofazl Movafagh; Hossein Darvish; Somayeh Kazeminasab; Monavvar Andarva; Pegah Namdar-Aligoodarzi; Mina Ohadi
Journal:  Mol Genet Genomics       Date:  2017-02-18       Impact factor: 3.291

6.  Gene expression imputation across multiple brain regions provides insights into schizophrenia risk.

Authors:  Laura M Huckins; Amanda Dobbyn; Douglas M Ruderfer; Gabriel Hoffman; Weiqing Wang; Antonio F Pardiñas; Veera M Rajagopal; Thomas D Als; Hoang T Nguyen; Kiran Girdhar; James Boocock; Panos Roussos; Menachem Fromer; Robin Kramer; Enrico Domenici; Eric R Gamazon; Shaun Purcell; Ditte Demontis; Anders D Børglum; James T R Walters; Michael C O'Donovan; Patrick Sullivan; Michael J Owen; Bernie Devlin; Solveig K Sieberts; Nancy J Cox; Hae Kyung Im; Pamela Sklar; Eli A Stahl
Journal:  Nat Genet       Date:  2019-03-25       Impact factor: 38.330

Review 7.  Distribution of disease-associated copy number variants across distinct disorders of cognitive development.

Authors:  Matthew F Pescosolido; Ece D Gamsiz; Shailender Nagpal; Eric M Morrow
Journal:  J Am Acad Child Adolesc Psychiatry       Date:  2013-04       Impact factor: 8.829

8.  Structural architecture of SNP effects on complex traits.

Authors:  Eric R Gamazon; Nancy J Cox; Lea K Davis
Journal:  Am J Hum Genet       Date:  2014-10-09       Impact factor: 11.025

9.  Adolescent stress leads to glutamatergic disturbance through dopaminergic abnormalities in the prefrontal cortex of genetically vulnerable mice.

Authors:  Yurie Matsumoto; Minae Niwa; Akihiro Mouri; Yukihiro Noda; Takeshi Fukushima; Norio Ozaki; Toshitaka Nabeshima
Journal:  Psychopharmacology (Berl)       Date:  2017-07-29       Impact factor: 4.530

10.  Integrated Post-GWAS Analysis Sheds New Light on the Disease Mechanisms of Schizophrenia.

Authors:  Jhih-Rong Lin; Ying Cai; Quanwei Zhang; Wen Zhang; Rubén Nogales-Cadenas; Zhengdong D Zhang
Journal:  Genetics       Date:  2016-10-17       Impact factor: 4.562

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