Literature DB >> 20484529

Correcting the bias of spike field coherence estimators due to a finite number of spikes.

D W Grasse1, K A Moxon.   

Abstract

The coherence between oscillatory activity in local field potentials (LFPs) and single neuron action potentials, or spikes, has been suggested as a neural substrate for the representation of information. The power spectrum of a spike-triggered average (STA) is commonly used to estimate spike field coherence (SFC). However, when a finite number of spikes is used to construct the STA, the coherence estimator is biased. We introduce here a correction for the bias imposed by the limited number of spikes available in experimental conditions. In addition, we present an alternative method for estimating SFC from an STA by using a filter bank approach. This method is shown to be more appropriate in some analyses, such as comparing coherence across frequency bands. The proposed bias correction is a linear transformation derived from an idealized model of spike-field interaction but is shown to hold in more realistic settings. Uncorrected and corrected SFC estimates from both estimation methods are compared across multiple simulated spike-field models and experimentally collected data. The bias correction was shown to reduce the bias of the estimators, but add variance. However, the corrected estimates had a reduced or unchanged mean squared error in the majority of conditions evaluated. The bias correction provides an effective way to reduce bias in an SFC estimator without increasing the mean squared error.

Mesh:

Year:  2010        PMID: 20484529     DOI: 10.1152/jn.00610.2009

Source DB:  PubMed          Journal:  J Neurophysiol        ISSN: 0022-3077            Impact factor:   2.714


  12 in total

1.  Rate-adjusted spike-LFP coherence comparisons from spike-train statistics.

Authors:  Mikio C Aoi; Kyle Q Lepage; Mark A Kramer; Uri T Eden
Journal:  J Neurosci Methods       Date:  2014-11-24       Impact factor: 2.390

2.  Switching neuronal inputs by differential modulations of gamma-band phase-coherence.

Authors:  Iris Grothe; Simon D Neitzel; Sunita Mandon; Andreas K Kreiter
Journal:  J Neurosci       Date:  2012-11-14       Impact factor: 6.167

3.  Primary sensorimotor cortex exhibits complex dependencies of spike-field coherence on neuronal firing rates, field power, and behavior.

Authors:  F I Arce-McShane; B J Sessle; C F Ross; N G Hatsopoulos
Journal:  J Neurophysiol       Date:  2018-03-28       Impact factor: 2.714

4.  Improved measures of phase-coupling between spikes and the Local Field Potential.

Authors:  Martin Vinck; Francesco Paolo Battaglia; Thilo Womelsdorf; Cyriel Pennartz
Journal:  J Comput Neurosci       Date:  2011-12-21       Impact factor: 1.621

5.  Kv1 channels control spike threshold dynamics and spike timing in cortical pyramidal neurones.

Authors:  Matthew H Higgs; William J Spain
Journal:  J Physiol       Date:  2011-09-12       Impact factor: 5.182

6.  Sensory representation of visual stimuli in the coupling of low-frequency phase to spike times.

Authors:  Mohammad Zarei; Mehran Jahed; Mohsen Parto Dezfouli; Mohammad Reza Daliri
Journal:  Brain Struct Funct       Date:  2022-02-01       Impact factor: 3.270

7.  Effect of amplitude correlations on coherence in the local field potential.

Authors:  Ramanujan Srinath; Supratim Ray
Journal:  J Neurophysiol       Date:  2014-04-30       Impact factor: 2.714

8.  Neuronal coding of multiscale temporal features in communication sequences within the bat auditory cortex.

Authors:  Francisco García-Rosales; M Jerome Beetz; Yuranny Cabral-Calderin; Manfred Kössl; Julio C Hechavarria
Journal:  Commun Biol       Date:  2018-11-20

9.  Low-Frequency Spike-Field Coherence Is a Fingerprint of Periodicity Coding in the Auditory Cortex.

Authors:  Francisco García-Rosales; Lisa M Martin; M Jerome Beetz; Yuranny Cabral-Calderin; Manfred Kössl; Julio C Hechavarria
Journal:  iScience       Date:  2018-10-16

10.  Introducing a Comprehensive Framework to Measure Spike-LFP Coupling.

Authors:  Mohammad Zarei; Mehran Jahed; Mohammad Reza Daliri
Journal:  Front Comput Neurosci       Date:  2018-10-15       Impact factor: 2.380

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