Literature DB >> 20472731

Animal-to-animal variation in fecal microbial diversity among beef cattle.

Lisa M Durso1, Gregory P Harhay, Timothy P L Smith, James L Bono, Todd Z Desantis, Dayna M Harhay, Gary L Andersen, James E Keen, William W Laegreid, Michael L Clawson.   

Abstract

The intestinal microbiota of beef cattle are important for animal health, food safety, and methane emissions. This full-length sequencing survey of 11,171 16S rRNA genes reveals animal-to-animal variation in communities that cannot be attributed to breed, gender, diet, age, or weather. Beef communities differ from those of dairy. Core bovine taxa are identified.

Entities:  

Mesh：

Substances：

Year:  2010        PMID： 20472731      PMCID： PMC2901724          DOI： 10.1128/AEM.00207-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  18 in total

Review 1.  Gut flora in health and disease.

Authors:  Francisco Guarner; Juan-R Malagelada
Journal:  Lancet       Date:  2003-02-08       Impact factor: 79.321

2.  Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness.

Authors:  Patrick D Schloss; Jo Handelsman
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

3.  Diversity of the human intestinal microbial flora.

Authors:  Paul B Eckburg; Elisabeth M Bik; Charles N Bernstein; Elizabeth Purdom; Les Dethlefsen; Michael Sargent; Steven R Gill; Karen E Nelson; David A Relman
Journal:  Science       Date:  2005-04-14       Impact factor: 47.728

4.  Bias and artifacts in multitemplate polymerase chain reactions (PCR).

Authors:  Takahiro Kanagawa
Journal:  J Biosci Bioeng       Date:  2003       Impact factor: 2.894

5.  Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy.

Authors:  Qiong Wang; George M Garrity; James M Tiedje; James R Cole
Journal:  Appl Environ Microbiol       Date:  2007-06-22       Impact factor: 4.792

6.  Experimental factors affecting PCR-based estimates of microbial species richness and evenness.

Authors:  Anna Engelbrektson; Victor Kunin; Kelly C Wrighton; Natasha Zvenigorodsky; Feng Chen; Howard Ochman; Philip Hugenholtz
Journal:  ISME J       Date:  2010-01-21       Impact factor: 10.302

7.  Negative effects of sample pooling on PCR-based estimates of soil microbial richness and community structure.

Authors:  Daniel K Manter; Tiffany L Weir; Jorge M Vivanco
Journal:  Appl Environ Microbiol       Date:  2010-02-05       Impact factor: 4.792

8.  New aspects of Salmonella infection in broiler production.

Authors:  E Nurmi; M Rantala
Journal:  Nature       Date:  1973-01-19       Impact factor: 49.962

9.  Methane emissions from cattle.

Authors:  K A Johnson; D E Johnson
Journal:  J Anim Sci       Date:  1995-08       Impact factor: 3.159

10.  Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP).

Authors:  Scot E Dowd; Todd R Callaway; Randall D Wolcott; Yan Sun; Trevor McKeehan; Robert G Hagevoort; Thomas S Edrington
Journal:  BMC Microbiol       Date:  2008-07-24       Impact factor: 3.605
View more
  58 in total

1.  Characterization of the cellulolytic bacteria communities along the gastrointestinal tract of Chinese Mongolian sheep by using PCR-DGGE and real-time PCR analysis.

Authors:  Yan Zeng; Dong Zeng; Yan Zhang; Xueqin Ni; Yurui Tang; Hui Zhu; Hesong Wang; Zhongqiong Yin; Kangcheng Pan; Bo Jing
Journal:  World J Microbiol Biotechnol       Date:  2015-05-01       Impact factor: 3.312

2.  Analysis of the bacterial diversity in the fecal material of the endangered Yangtze finless porpoise, Neophocaena phocaenoides asiaeorientalis.

Authors:  Richard William McLaughlin; Minmin Chen; Jinsong Zheng; Qingzhong Zhao; Ding Wang
Journal:  Mol Biol Rep       Date:  2011-12-27       Impact factor: 2.316

3.  Fecal bacterial community of finishing beef steers fed ruminally protected and non-protected active dried yeast.

Authors:  Tao Ran; Peixin Jiao; Ousama AlZahal; Xiaolai Xie; Karen A Beauchemin; Dongyan Niu; Wenzhu Yang
Journal:  J Anim Sci       Date:  2020-04-01       Impact factor: 3.159

4.  Bacterial community associated with the intestinal tract of P. monodon in commercial farms.

Authors:  Sage Chaiyapechara; Wanilada Rungrassamee; Ittipon Suriyachay; Yanin Kuncharin; Amornpan Klanchui; Nitsara Karoonuthaisiri; Pikul Jiravanichpaisal
Journal:  Microb Ecol       Date:  2011-09-14       Impact factor: 4.552

5.  Sources of bacteria in outdoor air across cities in the midwestern United States.

Authors:  Robert M Bowers; Amy P Sullivan; Elizabeth K Costello; Jeff L Collett; Rob Knight; Noah Fierer
Journal:  Appl Environ Microbiol       Date:  2011-07-29       Impact factor: 4.792

6.  Temporal dynamics of the cecal gut microbiota of juvenile arctic ground squirrels: a strong litter effect across the first active season.

Authors:  Timothy J Stevenson; C Loren Buck; Khrystyne N Duddleston
Journal:  Appl Environ Microbiol       Date:  2014-05-02       Impact factor: 4.792

7.  Community structures of fecal bacteria in cattle from different animal feeding operations.

Authors:  Orin C Shanks; Catherine A Kelty; Shawn Archibeque; Michael Jenkins; Ryan J Newton; Sandra L McLellan; Susan M Huse; Mitchell L Sogin
Journal:  Appl Environ Microbiol       Date:  2011-03-04       Impact factor: 4.792

8.  Human-Associated Lachnospiraceae Genetic Markers Improve Detection of Fecal Pollution Sources in Urban Waters.

Authors:  Shuchen Feng; Melinda Bootsma; Sandra L McLellan
Journal:  Appl Environ Microbiol       Date:  2018-07-02       Impact factor: 4.792

9.  Newly cultured bacteria with broad diversity isolated from eight-week continuous culture enrichments of cow feces on complex polysaccharides.

Authors:  Cherie J Ziemer
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

10.  Analysis of the Gut Microbial Diversity of Dairy Cows During Peak Lactation by PacBio Single-Molecule Real-Time (SMRT) Sequencing.

Authors:  Weicheng Li; Qiangchuan Hou; Yanjie Wang; Huimin Ma; Yahua Liu; Feiyan Zhao; Jing Li; Lai-Yu Kwok; Jie Yu; Zhihong Sun; Tiansong Sun
Journal:  Curr Microbiol       Date:  2018-06-15       Impact factor: 2.188
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.