Literature DB >> 20457067

Simple and highly effective DNA extraction methods from old skeletal remains using silica columns.

Hwan Young Lee1, Myung Jin Park, Na Young Kim, Jeong Eun Sim, Woo Ick Yang, Kyoung-Jin Shin.   

Abstract

The recovery of DNA data from old skeletal remains is often difficult due to degraded and very low yield of extracted DNA and the presence of PCR inhibitors. Herein, we compared several silica-based DNA extraction methods from artificially degraded DNA, DNA with PCR inhibitors and DNA from old skeletal remains using quantitative real-time PCR. We present a modified large-scale silica-based extraction combined with complete demineralization, that enables maximum DNA recovery and efficient elimination of PCR inhibitors. This is performed with high concentration of EDTA solution for demineralization of bone powder followed by QIAamp spin columns and buffers from the QIAquick PCR purification kit. We have successfully used this modified technique to perform STR analysis for 55-year-old skeletal remains. The results of this study will contribute to solve the forensic cases dealing with skeletal remains.
Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

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Year:  2010        PMID: 20457067     DOI: 10.1016/j.fsigen.2009.10.014

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  9 in total

1.  A genetic investigation of Korean mummies from the Joseon Dynasty.

Authors:  Na Young Kim; Hwan Young Lee; Myung Jin Park; Woo Ick Yang; Kyoung-Jin Shin
Journal:  Mol Biol Rep       Date:  2010-03-21       Impact factor: 2.316

2.  As solid as a rock-comparison of CE- and MPS-based analyses of the petrosal bone as a source of DNA for forensic identification of challenging cranial bones.

Authors:  Galina Kulstein; Thorsten Hadrys; Peter Wiegand
Journal:  Int J Legal Med       Date:  2017-07-28       Impact factor: 2.686

3.  Effective removal of co-purified inhibitors from extracted DNA samples using synchronous coefficient of drag alteration (SCODA) technology.

Authors:  Sarah Schmedes; Pamela Marshall; Jonathan L King; Bruce Budowle
Journal:  Int J Legal Med       Date:  2012-12-20       Impact factor: 2.686

4.  Highly efficient and automated extraction of DNA from human remains using a modified EZ1 protocol.

Authors:  Anna Barbaro; Sasha Samar; Giacomo Falcone; Angelo La Marca
Journal:  Forensic Sci Res       Date:  2021-01-18

5.  Highly efficient nuclear DNA typing of the World War II skeletal remains using three new autosomal short tandem repeat amplification kits with the extended European Standard Set of loci.

Authors:  Irena Zupanic Pajnic; Barbara Gornjak Pogorelc; Joze Balazic; Tomaz Zupanc; Borut Stefanic
Journal:  Croat Med J       Date:  2012-02-15       Impact factor: 1.351

6.  DNA Purification Cell Lysis and Wash Step Modifications for Low-Template DNA Sample Processing.

Authors:  Sydney I Menchhoff; Milady T Delacruz; Madison E Hytinen; Jordan O Cox; Marilyn T Miller; Tracey Dawson Cruz
Journal:  J Forensic Sci       Date:  2019-10-02       Impact factor: 1.717

Review 7.  DNA recovery and analysis from skeletal material in modern forensic contexts.

Authors:  Krista E Latham; Jessica J Miller
Journal:  Forensic Sci Res       Date:  2018-10-08

Review 8.  Fragment analysis in forensic anthropology.

Authors:  Douglas H Ubelaker; Yaohan Wu
Journal:  Forensic Sci Res       Date:  2020-12-28

9.  DNA capture and next-generation sequencing can recover whole mitochondrial genomes from highly degraded samples for human identification.

Authors:  Jennifer E L Templeton; Paul M Brotherton; Bastien Llamas; Julien Soubrier; Wolfgang Haak; Alan Cooper; Jeremy J Austin
Journal:  Investig Genet       Date:  2013-12-02
  9 in total

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