Literature DB >> 20437080

The two Arabidopsis RPS6 genes, encoding for cytoplasmic ribosomal proteins S6, are functionally equivalent.

Audrey Creff1, Rodnay Sormani, Thierry Desnos.   

Abstract

Many eukaryotic genomes have experienced ancient whole-genome duplication (WGD) followed by massive gene loss. These eliminations were not random since some gene families were preferentially retained as duplicates. The gene balance hypothesis suggests that those genes with dosage reduction can imbalance their interacting partners or complex, resulting in decreased fitness. In Arabidopsis, the cytoplasmic ribosomal proteins (RP) are encoded by gene families with at least two members. We have focused our study on the two RPS6 genes in an attempt to understand why they have been retained as duplicates. We demonstrate that RPS6 function is vital for the plant. We also show that reducing the level of RPS6 accumulation (in the knock-out rps6a or rps6b single mutants, or in the double heterozygous RPS6A/rps6a,RPS6B/rps6b), confers a slow growth phenotype (haplodeficiency). Importantly, we demonstrate that the functions of two RPS6 genes are redundant and interchangeable. Finally, like in most other described Arabidopsis rp mutants, we observed that a reduced RPS6 level slightly alters the dorsoventral leaf patterning. Our results support the idea that the Arabidopsis RPS6 gene duplicates were evolutionarily retained in order to maintain an expression level necessary to sustain the translational demand of the cell, in agreement with the gene balance hypothesis.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20437080     DOI: 10.1007/s11103-010-9639-y

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  70 in total

1.  Modeling gene and genome duplications in eukaryotes.

Authors:  Steven Maere; Stefanie De Bodt; Jeroen Raes; Tineke Casneuf; Marc Van Montagu; Martin Kuiper; Yves Van de Peer
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-30       Impact factor: 11.205

Review 2.  The gene balance hypothesis: from classical genetics to modern genomics.

Authors:  James A Birchler; Reiner A Veitia
Journal:  Plant Cell       Date:  2007-02-09       Impact factor: 11.277

Review 3.  Signals and prepatterns: new insights into organ polarity in plants.

Authors:  Aman Y Husbands; Daniel H Chitwood; Yevgeniy Plavskin; Marja C P Timmermans
Journal:  Genes Dev       Date:  2009-09-01       Impact factor: 11.361

4.  Heat-shock-induced alterations of ribosomal protein phosphorylation in plant cell cultures.

Authors:  K D Scharf; L Nover
Journal:  Cell       Date:  1982-09       Impact factor: 41.582

5.  Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution.

Authors:  Guillaume Blanc; Kenneth H Wolfe
Journal:  Plant Cell       Date:  2004-06-18       Impact factor: 11.277

6.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

7.  Drosophila homolog of the human S6 ribosomal protein is required for tumor suppression in the hematopoietic system.

Authors:  K L Watson; K D Konrad; D F Woods; P J Bryant
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-01       Impact factor: 11.205

8.  Auxin-mediated ribosomal biogenesis regulates vacuolar trafficking in Arabidopsis.

Authors:  Abel Rosado; Eun Ju Sohn; Georgia Drakakaki; Songqin Pan; Alexandra Swidergal; Yuqing Xiong; Byung-Ho Kang; Ray A Bressan; Natasha V Raikhel
Journal:  Plant Cell       Date:  2010-01-08       Impact factor: 11.277

9.  Three PIGGYBACK genes that specifically influence leaf patterning encode ribosomal proteins.

Authors:  Violaine Pinon; J Peter Etchells; Pascale Rossignol; Sarah A Collier; Juana M Arroyo; Robert A Martienssen; Mary E Byrne
Journal:  Development       Date:  2008-02-27       Impact factor: 6.868

10.  Effects of partial suppression of ribosomal protein S6 on organ formation in Arabidopsis thaliana.

Authors:  Takashi Morimoto; Yoshihito Suzuki; Isomaro Yamaguchi
Journal:  Biosci Biotechnol Biochem       Date:  2002-11       Impact factor: 2.043

View more
  34 in total

1.  Translational Regulation of Cytoplasmic mRNAs.

Authors:  Bijoyita Roy; Albrecht G von Arnim
Journal:  Arabidopsis Book       Date:  2013-07-18

2.  Involvement of ribosomal protein RPL27a in meristem activity and organ development.

Authors:  Dóra Szakonyi; Mary E Byrne
Journal:  Plant Signal Behav       Date:  2011-05-01

3.  Jasmonate controls leaf growth by repressing cell proliferation and the onset of endoreduplication while maintaining a potential stand-by mode.

Authors:  Sandra Noir; Moritz Bömer; Naoki Takahashi; Takashi Ishida; Tjir-Li Tsui; Virginia Balbi; Hugh Shanahan; Keiko Sugimoto; Alessandra Devoto
Journal:  Plant Physiol       Date:  2013-02-25       Impact factor: 8.340

Review 4.  How do 'housekeeping' genes control organogenesis?--Unexpected new findings on the role of housekeeping genes in cell and organ differentiation.

Authors:  Hirokazu Tsukaya; Mary E Byrne; Gorou Horiguchi; Munetaka Sugiyama; Mieke Van Lijsebettens; Michael Lenhard
Journal:  J Plant Res       Date:  2012-08-26       Impact factor: 2.629

5.  A Flexible Low Cost Hydroponic System for Assessing Plant Responses to Small Molecules in Sterile Conditions.

Authors:  Carolina C Monte-Bello; Elias F Araujo; Marina C M Martins; Valeria Mafra; Viviane C H da Silva; Viviane Celente; Camila Caldana
Journal:  J Vis Exp       Date:  2018-08-25       Impact factor: 1.355

6.  Balance between Cytosolic and Chloroplast Translation Affects Leaf Variegation.

Authors:  Ruijuan Wang; Jun Zhao; Min Jia; Ni Xu; Shuang Liang; Jingxia Shao; Yafei Qi; Xiayan Liu; Lijun An; Fei Yu
Journal:  Plant Physiol       Date:  2017-11-15       Impact factor: 8.340

Review 7.  Recent Discoveries on the Role of TOR (Target of Rapamycin) Signaling in Translation in Plants.

Authors:  Mikhail Schepetilnikov; Lyubov A Ryabova
Journal:  Plant Physiol       Date:  2017-11-09       Impact factor: 8.340

8.  Nuclear ribosome biogenesis mediated by the DIM1A rRNA dimethylase is required for organized root growth and epidermal patterning in Arabidopsis.

Authors:  Yana Wieckowski; John Schiefelbein
Journal:  Plant Cell       Date:  2012-07-24       Impact factor: 11.277

Review 9.  The role of target of rapamycin signaling networks in plant growth and metabolism.

Authors:  Yan Xiong; Jen Sheen
Journal:  Plant Physiol       Date:  2014-01-02       Impact factor: 8.340

10.  Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.

Authors:  Hongtao Zhang; Houjiang Zhou; Lidija Berke; Albert J R Heck; Shabaz Mohammed; Ben Scheres; Frank L H Menke
Journal:  Mol Cell Proteomics       Date:  2013-01-17       Impact factor: 5.911

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.