Literature DB >> 20428882

Genetic analysis of eight population groups living in Taiwan using a 13 X-chromosomal STR loci multiplex system.

Hsiao-Lin Hwa1, James Chun-I Lee, Yih-Yuan Chang, Hsiang-Yi Yin, Ya-Hui Chen, Li-Hui Tseng, Yi-Ning Su, Tsang-Ming Ko.   

Abstract

A 13 X-chromosomal short tandem repeat (STR) multiplex system (DXS6807, DXS8378, DSX9902, DXS7132, DXS9898, DXS6809, DXS6789, DXS7424, DXS101, GATA172D05, HPRTB, DXS8377, and DXS7423) was tested on 1,037 DNA samples from eight population groups currently living in Taiwan. Different distributions of the allelic frequencies in different populations were presented. DXS8377 and DXS101 were the two most polymorphic loci in these eight populations, whereas DXS7423 was the least informative marker in most of the populations studied. The genetic distances between the populations and the constructed phylogenetic tree revealed a long genetic distance between Asian and Caucasian populations as well as isolation of the Tao population. The phylogenetic tree grouped populations into clusters compatible with their ethnogeographic relationships. This 13 X-chromosomal short tandem repeat multiplex system offers a considerable number of polymorphic patterns in different populations. This system can be useful in forensic identification casework and ethnogeographic research.

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Year:  2010        PMID: 20428882     DOI: 10.1007/s00414-009-0414-z

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  20 in total

1.  16 X-chromosome STR loci frequency data from a German population.

Authors:  J Edelman; S Hering; M Michael; R Lessig; D Deischel; G Meier-Sundhausen; L Roewer; I Plate; R Szibor
Journal:  Forensic Sci Int       Date:  2001-12-27       Impact factor: 2.395

2.  Validation of the STR DXS7424 and the linkage situation on the X-chromosome.

Authors:  Jeanett Edelmann; Sandra Hering; Eberhard Kuhlisch; Reinhard Szibor
Journal:  Forensic Sci Int       Date:  2002-02-18       Impact factor: 2.395

3.  Genetic analysis of 18 X-linked short tandem repeat markers in Korean population.

Authors:  Sang Hee Shin; Jin Seok Yu; Sun Wha Park; Gi Sik Min; Ki Wha Chung
Journal:  Forensic Sci Int       Date:  2005-01-06       Impact factor: 2.395

4.  Study of six X-linked tetranucleotide microsatellites: population data from five Spanish regions.

Authors:  Maria T Zarrabeitia; Ana Alonso; Javier Martin; Miguel A Gonzalez-Gay; Juan C Martin-Escudero; Marian Martinez de Pancorbo; Pilar Sanz; Francisco Ruiz-Cabello; Jose A Riancho
Journal:  Int J Legal Med       Date:  2005-11-19       Impact factor: 2.686

5.  Development of a heptaplex PCR system to analyse X-chromosome STR loci from five Italian population samples. A collaborative study.

Authors:  Carla Bini; Stefania Ceccardi; Gianmarco Ferri; Susi Pelotti; Milena Alù; Enrica Roncaglia; Giovanni Beduschi; Luciana Caenazzo; Elena Ponzano; Paola Tasinato; Chiara Turchi; Loredana Buscemi; Morena Mazzanti; Adriano Tagliabracci; Chiara Toni; Isabella Spinetti; Ranieri Domenici; Silvano Presciuttini
Journal:  Forensic Sci Int       Date:  2005-10-29       Impact factor: 2.395

6.  MiniX-STR multiplex system population study in Japan and application to degraded DNA analysis.

Authors:  H Asamura; H Sakai; K Kobayashi; M Ota; H Fukushima
Journal:  Int J Legal Med       Date:  2006-02-11       Impact factor: 2.686

7.  Genome-wide analysis indicates more Asian than Melanesian ancestry of Polynesians.

Authors:  Manfred Kayser; Oscar Lao; Kathrin Saar; Silke Brauer; Xingyu Wang; Peter Nürnberg; Ronald J Trent; Mark Stoneking
Journal:  Am J Hum Genet       Date:  2008-01       Impact factor: 11.025

8.  A multiplex PCR for 11 X chromosome STR markers and population data from a Brazilian Amazon Region.

Authors:  Elzemar Martins Ribeiro Rodrigues; Fabio Pereira das Neves Leite; Mara Helena Hutz; Teresinha de Jesus Brabo Ferreira Palha; Andrea Kely Campos Ribeiro dos Santos; Sidney Emanuel Batista dos Santos
Journal:  Forensic Sci Int Genet       Date:  2007-12-04       Impact factor: 4.882

9.  Genetic evidence for the proto-Austronesian homeland in Asia: mtDNA and nuclear DNA variation in Taiwanese aboriginal tribes.

Authors:  T Melton; S Clifford; J Martinson; M Batzer; M Stoneking
Journal:  Am J Hum Genet       Date:  1998-12       Impact factor: 11.025

10.  Arlequin (version 3.0): an integrated software package for population genetics data analysis.

Authors:  Laurent Excoffier; Guillaume Laval; Stefan Schneider
Journal:  Evol Bioinform Online       Date:  2007-02-23       Impact factor: 1.625

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  1 in total

1.  Genetic variation study of 12 X chromosomal STR in central Thailand population.

Authors:  Kornkiat Vongpaisarnsin; Achara Boonlert; Kawin Rasmeepaisarn; Piyawan Dangkao
Journal:  Int J Legal Med       Date:  2016-04-08       Impact factor: 2.686

  1 in total

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