Literature DB >> 16328422

Study of six X-linked tetranucleotide microsatellites: population data from five Spanish regions.

Maria T Zarrabeitia1, Ana Alonso, Javier Martin, Miguel A Gonzalez-Gay, Juan C Martin-Escudero, Marian Martinez de Pancorbo, Pilar Sanz, Francisco Ruiz-Cabello, Jose A Riancho.   

Abstract

We studied six X-linked microsatellites in a large group of Spanish individuals (n=614) from five different regions located in northern, central and southern Spain. All the markers had tetranucleotide repeat units (DXS9895, DXS9898, DXS7130, DXS7132, GATA172D05 and DXS6789). They were amplified in two triplex PCR reactions. There were no significant sex- or region-related differences in allelic frequencies, suggesting that general national databases can be adequate as a reference for X-linked markers. The analysis of those six short tandem repeats combined in 316 males revealed 300 different "temporary haplotypes", 283 of which were found only once. There was no evidence for statistically significant linkage disequilibrium among the loci studied. Therefore these markers are quite polymorphic and useful for forensic purposes.

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Year:  2005        PMID: 16328422     DOI: 10.1007/s00414-005-0057-7

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  15 in total

1.  Simultaneous detection of multiple STR loci on sex chromosomes for forensic testing of sex and identity.

Authors:  Z Tun; K Honda; M Nakatome; M Nakamura; S Shimada; Y Ogura; H Kuroki; M Yamazaki; M Terada; R Matoba
Journal:  J Forensic Sci       Date:  1999-07       Impact factor: 1.832

2.  Population data on the X chromosome short tandem repeat locus HumHPRTB in two regions of Germany.

Authors:  R Szibor; S Lautsch; I Plate; N Beck
Journal:  J Forensic Sci       Date:  2000-01       Impact factor: 1.832

3.  Juxtaposed regions of extensive and minimal linkage disequilibrium in human Xq25 and Xq28.

Authors:  P Taillon-Miller; I Bauer-Sardiña; N L Saccone; J Putzel; T Laitinen; A Cao; J Kere; G Pilia; J P Rice; P Y Kwok
Journal:  Nat Genet       Date:  2000-07       Impact factor: 38.330

4.  Sequence structure and population data of two X-linked markers: DXS7423 and DXS8377.

Authors:  María T Zarrabeitia; Teresa Amigo; Carolina Sañudo; Marian Martínez de Pancorbo; José A Riancho
Journal:  Int J Legal Med       Date:  2002-12       Impact factor: 2.686

5.  Cell line DNA typing in forensic genetics--the necessity of reliable standards.

Authors:  Reinhard Szibor; Jeanett Edelmann; Sandra Hering; Ines Plate; Holger Wittig; Lutz Roewer; Peter Wiegand; Francesco Calì; Valentino Romano; Matthias Michael
Journal:  Forensic Sci Int       Date:  2003-12-17       Impact factor: 2.395

6.  The X-linked STRs DXS7130 and DXS6803.

Authors:  Jeanett Edelmann; Reinhard Szibor
Journal:  Forensic Sci Int       Date:  2003-09-09       Impact factor: 2.395

Review 7.  Use of X-linked markers for forensic purposes.

Authors:  R Szibor; M Krawczak; S Hering; J Edelmann; E Kuhlisch; D Krause
Journal:  Int J Legal Med       Date:  2003-02-15       Impact factor: 2.686

8.  DXS10011: studies on structure, allele distribution in three populations and genetic linkage to further q-telomeric chromosome X markers.

Authors:  Sandra Hering; Nicola Brundirs; Eberhard Kuhlisch; Jeanett Edelmann; Ines Plate; Mark Benecke; Pham Hung Van; Matthias Michael; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2004-07-10       Impact factor: 2.686

9.  Two X-chromosome STR loci DXS6803 and XS6793 frequency data in Chinese population.

Authors:  Yi Jia; Bin Zhou; Wei Bo Liang; Mei Li Lv; Lin Zhang
Journal:  J Forensic Sci       Date:  2004-07       Impact factor: 1.832

10.  Development of a highly polymorphic STR marker for identity testing purposes at the human androgen receptor gene (HUMARA).

Authors:  D Desmarais; Y Zhong; R Chakraborty; C Perreault; L Busque
Journal:  J Forensic Sci       Date:  1998-09       Impact factor: 1.832

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  7 in total

1.  Genetic analysis of eight population groups living in Taiwan using a 13 X-chromosomal STR loci multiplex system.

Authors:  Hsiao-Lin Hwa; James Chun-I Lee; Yih-Yuan Chang; Hsiang-Yi Yin; Ya-Hui Chen; Li-Hui Tseng; Yi-Ning Su; Tsang-Ming Ko
Journal:  Int J Legal Med       Date:  2010-04-29       Impact factor: 2.686

2.  Japanese population data for eight X-STR loci using two new quadruplex systems.

Authors:  H Asamura; H Sakai; M Ota; H Fukushima
Journal:  Int J Legal Med       Date:  2006-06-07       Impact factor: 2.686

3.  Forensic efficiency of microsatellites and single nucleotide polymorphisms on the X chromosome.

Authors:  María T Zarrabeitia; Verónica Mijares; José A Riancho
Journal:  Int J Legal Med       Date:  2007-04-14       Impact factor: 2.686

4.  Development of a five ChX STRs loci typing system.

Authors:  Qiu-ling Liu; De-jian Lv; Xiang-lin Wu; Hong-yu Sun; Xin-yao Wu; Hui-ling Lu
Journal:  Int J Legal Med       Date:  2008-02-05       Impact factor: 2.686

5.  A GEP-ISFG collaborative study on the optimization of an X-STR decaplex: data on 15 Iberian and Latin American populations.

Authors:  Leonor Gusmão; Paula Sánchez-Diz; Cíntia Alves; Iva Gomes; María Teresa Zarrabeitia; Mariel Abovich; Ivannia Atmetlla; Cecilia Bobillo; Luisa Bravo; Juan Builes; Laura Cainé; Raquel Calvo; Elizeu Carvalho; Mónica Carvalho; Regina Cicarelli; Laura Catelli; Daniel Corach; Marta Espinoza; Oscar García; Marcelo Malaghini; Joyce Martins; Fátima Pinheiro; Maria João Porto; Eduardo Raimondi; Jose Antonio Riancho; Amelia Rodríguez; Anayanci Rodríguez; Belén Rodríguez Cardozo; Vicente Schneider; Sandra Silva; Celso Tavares; Ulises Toscanini; Carlos Vullo; Martin Whittle; Iñaki Yurrebaso; Angel Carracedo; António Amorim
Journal:  Int J Legal Med       Date:  2008-12-12       Impact factor: 2.686

6.  An INDEL polymorphism at the X-STR GATA172D05 flanking region.

Authors:  Elzemar Martins Ribeiro Rodrigues; Ney Pereira Carneiro dos Santos; Andrea Kely Campos Ribeiro dos Santos; Anderson Nonato Marinho; Marco Antonio Zago; Iva Gomes; António Amorim; Leonor Gusmão; Sidney Emanuel Batista dos Santos
Journal:  Int J Legal Med       Date:  2008-12-02       Impact factor: 2.686

7.  Genetic diversity of 10 X chromosome STRs in northern Portugal.

Authors:  Rui Pereira; Iva Gomes; António Amorim; Leonor Gusmão
Journal:  Int J Legal Med       Date:  2007-01-06       Impact factor: 2.791

  7 in total

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