Literature DB >> 20411264

Laboratory Animal Management Assistant (LAMA): a LIMS for active research colonies.

Marko Milisavljevic1, Taryn Hearty, Tony Y T Wong, Elodie Portales-Casamar, Elizabeth M Simpson, Wyeth W Wasserman.   

Abstract

Laboratory Animal Management Assistant (LAMA) is an internet-based system for tracking large laboratory mouse colonies. It has a user-friendly interface with powerful search capabilities that ease day-to-day tasks such as tracking breeding cages and weaning litters. LAMA was originally developed to manage hundreds of new mouse strains generated by a large functional genomics program, the Pleiades Promoter Project ( http://www.pleiades.org ). The software system has proven to be highly flexible, suitable for diverse management approaches to mouse colonies. It allows custom tagging and grouping of animals, simplifying project-specific handling and access to data. Finally, LAMA was developed in close collaboration with mouse technicians to ease the transition from paper- or Excel-based management systems to computerized tracking, allowing data export in a popular spreadsheet format and automatic printing of cage cards. LAMA is an open-access software tool, freely available to the research community at http://launchpad.net/mousedb .

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Year:  2010        PMID: 20411264      PMCID: PMC5047758          DOI: 10.1007/s00335-010-9258-6

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  9 in total

1.  MouseBank: a database application for managing transgenic mouse breeding programs.

Authors:  R Hopley; A Zimmer
Journal:  Biotechniques       Date:  2001-01       Impact factor: 1.993

2.  LAMS(TM)--a laboratory animal management system.

Authors:  M A Mckie; S Webb
Journal:  Mamm Genome       Date:  1999-04       Impact factor: 2.957

3.  MouseNet database: digital management of a large-scale mutagenesis project.

Authors:  W Pargent; S Heffner; K F Schäble; D Soewarto; H Fuchs; M Hrabé de Angelis
Journal:  Mamm Genome       Date:  2000-07       Impact factor: 2.957

4.  Computer program for inbred and-or hybrid animal breeding and production colonies. ORNL-TM-2210.

Authors:  B S Bishop; M G Hanna
Journal:  ORNL-TM Rep       Date:  1968-07

5.  Recordkeeping and database analysis of breeding colonies.

Authors:  L M Silver
Journal:  Methods Enzymol       Date:  1993       Impact factor: 1.600

6.  Simple databases to monitor the generation and organisation of transgenic mouse colonies.

Authors:  Lluís Montoliu
Journal:  Transgenic Res       Date:  2003-04       Impact factor: 2.788

Review 7.  Data and animal management software for large-scale phenotype screening.

Authors:  Keith A Ching; Michael P Cooke; Lisa M Tarantino; Hilmar Lapp
Journal:  Mamm Genome       Date:  2006-04-04       Impact factor: 2.957

8.  MICE, a program to track and monitor animals in animal facilities.

Authors:  K E Boulukos; P Pognonec
Journal:  BMC Genet       Date:  2001-03-08       Impact factor: 2.797

9.  MausDB: an open source application for phenotype data and mouse colony management in large-scale mouse phenotyping projects.

Authors:  Holger Maier; Christoph Lengger; Bruno Simic; Helmut Fuchs; Valérie Gailus-Durner; Martin Hrabé de Angelis
Journal:  BMC Bioinformatics       Date:  2008-03-26       Impact factor: 3.169

  9 in total
  4 in total

1.  SAPling: a Scan-Add-Print barcoding database system to label and track asexual organisms.

Authors:  Michael A Thomas; Eva-Maria Schötz
Journal:  J Exp Biol       Date:  2011-11-01       Impact factor: 3.312

2.  Conditional Allele Mouse Planner (CAMP): software to facilitate the planning and design of breeding strategies involving mice with conditional alleles.

Authors:  Jason D Hoffert; Trairak Pisitkun; R Lance Miller
Journal:  Transgenic Res       Date:  2011-08-26       Impact factor: 2.788

3.  Transforming microbial genotyping: a robotic pipeline for genotyping bacterial strains.

Authors:  Brian O'Farrell; Jana K Haase; Vimalkumar Velayudhan; Ronan A Murphy; Mark Achtman
Journal:  PLoS One       Date:  2012-10-29       Impact factor: 3.240

Review 4.  Principles and application of LIMS in mouse clinics.

Authors:  Holger Maier; Christine Schütt; Ralph Steinkamp; Anja Hurt; Elida Schneltzer; Philipp Gormanns; Christoph Lengger; Mark Griffiths; David Melvin; Neha Agrawal; Rafael Alcantara; Arthur Evans; David Gannon; Simon Holroyd; Christian Kipp; Navis Pretheeba Raj; David Richardson; Sophie LeBlanc; Laurent Vasseur; Hiroshi Masuya; Kimio Kobayashi; Tomohiro Suzuki; Nobuhiko Tanaka; Shigeharu Wakana; Alison Walling; David Clary; Juan Gallegos; Helmut Fuchs; Martin Hrabě de Angelis; Valerie Gailus-Durner
Journal:  Mamm Genome       Date:  2015-07-25       Impact factor: 2.957

  4 in total

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