Literature DB >> 20400562

Purification and characterization of OmcZ, an outer-surface, octaheme c-type cytochrome essential for optimal current production by Geobacter sulfurreducens.

Kengo Inoue1, Xinlei Qian, Leonor Morgado, Byoung-Chan Kim, Tünde Mester, Mounir Izallalen, Carlos A Salgueiro, Derek R Lovley.   

Abstract

Previous studies have demonstrated that Geobacter sulfurreducens requires the c-type cytochrome OmcZ, which is present in large (OmcZ(L); 50-kDa) and small (OmcZ(S); 30-kDa) forms, for optimal current production in microbial fuel cells. This protein was further characterized to aid in understanding its role in current production. Subcellular-localization studies suggested that OmcZ(S) was the predominant extracellular form of OmcZ. N- and C-terminal amino acid sequence analysis of purified OmcZ(S) and molecular weight measurements indicated that OmcZ(S) is a cleaved product of OmcZ(L) retaining all 8 hemes, including 1 heme with the unusual c-type heme-binding motif CX(14)CH. The purified OmcZ(S) was remarkably thermally stable (thermal-denaturing temperature, 94.2 degrees C). Redox titration analysis revealed that the midpoint reduction potential of OmcZ(S) is approximately -220 mV (versus the standard hydrogen electrode [SHE]) with nonequivalent heme groups that cover a large reduction potential range (-420 to -60 mV). OmcZ(S) transferred electrons in vitro to a diversity of potential extracellular electron acceptors, such as Fe(III) citrate, U(VI), Cr(VI), Au(III), Mn(IV) oxide, and the humic substance analogue anthraquinone-2,6-disulfonate, but not Fe(III) oxide. The biochemical properties and extracellular localization of OmcZ suggest that it is well suited for promoting electron transfer in current-producing biofilms of G. sulfurreducens.

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Year:  2010        PMID: 20400562      PMCID: PMC2893489          DOI: 10.1128/AEM.00027-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  53 in total

1.  Comparison of electrode reduction activities of Geobacter sulfurreducens and an enriched consortium in an air-cathode microbial fuel cell.

Authors:  Shun'ichi Ishii; Kazuya Watanabe; Soichi Yabuki; Bruce E Logan; Yuji Sekiguchi
Journal:  Appl Environ Microbiol       Date:  2008-10-03       Impact factor: 4.792

2.  Power output and columbic efficiencies from biofilms of Geobacter sulfurreducens comparable to mixed community microbial fuel cells.

Authors:  K P Nevin; H Richter; S F Covalla; J P Johnson; T L Woodard; A L Orloff; H Jia; M Zhang; D R Lovley
Journal:  Environ Microbiol       Date:  2008-06-28       Impact factor: 5.491

3.  Thermodynamic characterization of triheme cytochrome PpcA from Geobacter sulfurreducens: evidence for a role played in e-/H+ energy transduction.

Authors:  Miguel Pessanha; Leonor Morgado; Ricardo O Louro; Yuri Y Londer; P Raj Pokkuluri; Marianne Schiffer; Carlos A Salgueiro
Journal:  Biochemistry       Date:  2006-11-21       Impact factor: 3.162

4.  OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens.

Authors:  Ching Leang; M V Coppi; D R Lovley
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

5.  Structural insights into the modulation of the redox properties of two Geobacter sulfurreducens homologous triheme cytochromes.

Authors:  Leonor Morgado; Marta Bruix; Valerie Orshonsky; Yuri Y Londer; Norma E C Duke; Xiaojing Yang; P Raj Pokkuluri; Marianne Schiffer; Carlos A Salgueiro
Journal:  Biochim Biophys Acta       Date:  2008-05-09

6.  Selection of a variant of Geobacter sulfurreducens with enhanced capacity for current production in microbial fuel cells.

Authors:  Hana Yi; Kelly P Nevin; Byoung-Chan Kim; Ashely E Franks; Anna Klimes; Leonard M Tender; Derek R Lovley
Journal:  Biosens Bioelectron       Date:  2009-05-14       Impact factor: 10.618

7.  The roles of outer membrane cytochromes of Shewanella and Geobacter in extracellular electron transfer.

Authors:  Liang Shi; David J Richardson; Zheming Wang; Sebastien N Kerisit; Kevin M Rosso; John M Zachara; James K Fredrickson
Journal:  Environ Microbiol Rep       Date:  2009-06-12       Impact factor: 3.541

8.  Microbial communities associated with electrodes harvesting electricity from a variety of aquatic sediments.

Authors:  D E Holmes; D R Bond; R A O'Neil; C E Reimers; L R Tender; D R Lovley
Journal:  Microb Ecol       Date:  2004-06-17       Impact factor: 4.552

9.  A dedicated haem lyase is required for the maturation of a novel bacterial cytochrome c with unconventional covalent haem binding.

Authors:  Robert S Hartshorne; Melanie Kern; Björn Meyer; Thomas A Clarke; Michael Karas; David J Richardson; Jörg Simon
Journal:  Mol Microbiol       Date:  2007-05       Impact factor: 3.501

10.  Anode biofilm transcriptomics reveals outer surface components essential for high density current production in Geobacter sulfurreducens fuel cells.

Authors:  Kelly P Nevin; Byoung-Chan Kim; Richard H Glaven; Jessica P Johnson; Trevor L Woodard; Barbara A Methé; Raymond J Didonato; Sean F Covalla; Ashley E Franks; Anna Liu; Derek R Lovley
Journal:  PLoS One       Date:  2009-05-20       Impact factor: 3.240

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  47 in total

Review 1.  Dissimilatory reduction of extracellular electron acceptors in anaerobic respiration.

Authors:  Katrin Richter; Marcus Schicklberger; Johannes Gescher
Journal:  Appl Environ Microbiol       Date:  2011-12-16       Impact factor: 4.792

2.  Two isoforms of Geobacter sulfurreducens PilA have distinct roles in pilus biogenesis, cytochrome localization, extracellular electron transfer, and biofilm formation.

Authors:  Lubna V Richter; Steven J Sandler; Robert M Weis
Journal:  J Bacteriol       Date:  2012-03-09       Impact factor: 3.490

Review 3.  In situ to in silico and back: elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling.

Authors:  Radhakrishnan Mahadevan; Bernhard Ø Palsson; Derek R Lovley
Journal:  Nat Rev Microbiol       Date:  2010-12-06       Impact factor: 60.633

4.  How the xap locus put electrical "Zap" in Geobacter sulfurreducens biofilms.

Authors:  Timothy S Magnuson
Journal:  J Bacteriol       Date:  2010-12-23       Impact factor: 3.490

5.  Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks.

Authors:  Yu Qiu; Harish Nagarajan; Mallory Embree; Wendy Shieu; Elisa Abate; Katy Juárez; Byung-Kwan Cho; James G Elkins; Kelly P Nevin; Christian L Barrett; Derek R Lovley; Bernhard O Palsson; Karsten Zengler
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  Enhanced uranium immobilization and reduction by Geobacter sulfurreducens biofilms.

Authors:  Dena L Cologgi; Allison M Speers; Blair A Bullard; Shelly D Kelly; Gemma Reguera
Journal:  Appl Environ Microbiol       Date:  2014-08-15       Impact factor: 4.792

Review 7.  The Functional Mechanisms and Application of Electron Shuttles in Extracellular Electron Transfer.

Authors:  Bin Huang; Shumei Gao; Zhixiang Xu; Huan He; Xuejun Pan
Journal:  Curr Microbiol       Date:  2017-11-10       Impact factor: 2.188

8.  The iron stimulon and fur regulon of Geobacter sulfurreducens and their role in energy metabolism.

Authors:  Mallory Embree; Yu Qiu; Wendy Shieu; Harish Nagarajan; Regina O'Neil; Derek Lovley; Karsten Zengler
Journal:  Appl Environ Microbiol       Date:  2014-02-28       Impact factor: 4.792

9.  Going wireless: Fe(III) oxide reduction without pili by Geobacter sulfurreducens strain JS-1.

Authors:  Jessica A Smith; Pier-Luc Tremblay; Pravin Malla Shrestha; Oona L Snoeyenbos-West; Ashley E Franks; Kelly P Nevin; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

10.  Genomic plasticity enables a secondary electron transport pathway in Shewanella oneidensis.

Authors:  M Schicklberger; G Sturm; J Gescher
Journal:  Appl Environ Microbiol       Date:  2012-12-07       Impact factor: 4.792

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