Literature DB >> 20397626

Determinants for phosphodiesterase 6 inhibition by its gamma-subunit.

Zhongming Zhang1, Nikolai O Artemyev.   

Abstract

The interaction of phosphodiesterase 6 (PDE6) with its inhibitory Pgamma-subunits (Pgamma) is unparalleled among PDE families and is central to vertebrate phototransduction. The C-terminus of Pgamma occludes the active site of PDE6, thereby preventing hydrolysis of cGMP. In this study, we examine the determinants of this critical interaction using structure-based loss-of-function mutagenesis of a chimeric PDE5/PDE6 catalytic domain and gain-of-function mutagenesis of the PDE5 catalytic domain. This analysis revealed the key role of PDE6-specific residues within the catalytic domain M-loop-alpha-helix 15 region and suggested an important contribution of the H-loop-M-loop interface to the PDE6 inhibition by the Pgamma C-terminus. Identification of the determinants for the PDE6-Pgamma interaction offers insights into the evolution of the visual effector enzyme.

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Year:  2010        PMID: 20397626      PMCID: PMC2864356          DOI: 10.1021/bi100354a

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  25 in total

1.  Analysis of PDE6 function using chimeric PDE5/6 catalytic domains.

Authors:  Hakim Muradov; Kimberly K Boyd; Nikolai O Artemyev
Journal:  Vision Res       Date:  2005-10-25       Impact factor: 1.886

2.  Phototransduction, dark adaptation, and rhodopsin regeneration the proctor lecture.

Authors:  Trevor D Lamb; Edward N Pugh
Journal:  Invest Ophthalmol Vis Sci       Date:  2006-12       Impact factor: 4.799

Review 3.  Phototransduction in mouse rods and cones.

Authors:  Yingbin Fu; King-Wai Yau
Journal:  Pflugers Arch       Date:  2007-01-17       Impact factor: 3.657

Review 4.  Biochemistry and physiology of cyclic nucleotide phosphodiesterases: essential components in cyclic nucleotide signaling.

Authors:  Marco Conti; Joseph Beavo
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

5.  Tunicates and not cephalochordates are the closest living relatives of vertebrates.

Authors:  Frédéric Delsuc; Henner Brinkmann; Daniel Chourrout; Hervé Philippe
Journal:  Nature       Date:  2006-02-23       Impact factor: 49.962

Review 6.  Cyclic GMP-hydrolyzing phosphodiesterases.

Authors:  Sharron H Francis; Jackie D Corbin; Erwin Bischoff
Journal:  Handb Exp Pharmacol       Date:  2009

7.  Structural basis of phosphodiesterase 6 inhibition by the C-terminal region of the gamma-subunit.

Authors:  Brandy Barren; Lokesh Gakhar; Hakim Muradov; Kimberly K Boyd; S Ramaswamy; Nikolai O Artemyev
Journal:  EMBO J       Date:  2009-10-01       Impact factor: 11.598

8.  Structural insight into substrate specificity of phosphodiesterase 10.

Authors:  Huanchen Wang; Yudong Liu; Jing Hou; Meiyan Zheng; Howard Robinson; Hengming Ke
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-26       Impact factor: 11.205

9.  Mechanism for the allosteric regulation of phosphodiesterase 2A deduced from the X-ray structure of a near full-length construct.

Authors:  Jayvardhan Pandit; Michael D Forman; Kimberly F Fennell; Keith S Dillman; Frank S Menniti
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-14       Impact factor: 11.205

10.  PDE6 in lamprey Petromyzon marinus: implications for the evolution of the visual effector in vertebrates.

Authors:  Hakim Muradov; Kimberly K Boyd; Vasily Kerov; Nikolai O Artemyev
Journal:  Biochemistry       Date:  2007-08-08       Impact factor: 3.162

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  7 in total

1.  Functional mapping of interacting regions of the photoreceptor phosphodiesterase (PDE6) γ-subunit with PDE6 catalytic dimer, transducin, and regulator of G-protein signaling9-1 (RGS9-1).

Authors:  Xiu-Jun Zhang; Xiong-Zhuo Gao; Wei Yao; Rick H Cote
Journal:  J Biol Chem       Date:  2012-06-04       Impact factor: 5.157

2.  Molecular architecture of photoreceptor phosphodiesterase elucidated by chemical cross-linking and integrative modeling.

Authors:  Xiaohui Zeng-Elmore; Xiong-Zhuo Gao; Riccardo Pellarin; Dina Schneidman-Duhovny; Xiu-Jun Zhang; Katie A Kozacka; Yang Tang; Andrej Sali; Robert J Chalkley; Rick H Cote; Feixia Chu
Journal:  J Mol Biol       Date:  2014-08-19       Impact factor: 5.469

3.  Allosteric Regulation of Rod Photoreceptor Phosphodiesterase 6 (PDE6) Elucidated by Chemical Cross-Linking and Quantitative Mass Spectrometry.

Authors:  Feixia Chu; Donna Hogan; Richa Gupta; Xiong-Zhuo Gao; Hieu T Nguyen; Rick H Cote
Journal:  J Mol Biol       Date:  2019-08-05       Impact factor: 5.469

4.  The GAFa domain of phosphodiesterase-6 contains a rod outer segment localization signal.

Authors:  Pallavi Cheguru; Zhongming Zhang; Nikolai O Artemyev
Journal:  J Neurochem       Date:  2013-11-20       Impact factor: 5.372

5.  Investigation of PDE5/PDE6 and PDE5/PDE11 selective potent tadalafil-like PDE5 inhibitors using combination of molecular modeling approaches, molecular fingerprint-based virtual screening protocols and structure-based pharmacophore development.

Authors:  Gülru Kayık; Nurcan Ş Tüzün; Serdar Durdagi
Journal:  J Enzyme Inhib Med Chem       Date:  2017-12       Impact factor: 5.051

6.  Evolution of Vertebrate Phototransduction: Cascade Activation.

Authors:  Trevor D Lamb; Hardip Patel; Aaron Chuah; Riccardo C Natoli; Wayne I L Davies; Nathan S Hart; Shaun P Collin; David M Hunt
Journal:  Mol Biol Evol       Date:  2016-05-11       Impact factor: 16.240

7.  Cone Phosphodiesterase-6γ' Subunit Augments Cone PDE6 Holoenzyme Assembly and Stability in a Mouse Model Lacking Both Rod and Cone PDE6 Catalytic Subunits.

Authors:  Wen-Tao Deng; Saravanan Kolandaivelu; Astra Dinculescu; Jie Li; Ping Zhu; Vince A Chiodo; Visvanathan Ramamurthy; William W Hauswirth
Journal:  Front Mol Neurosci       Date:  2018-07-09       Impact factor: 5.639

  7 in total

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