Literature DB >> 16256165

Analysis of PDE6 function using chimeric PDE5/6 catalytic domains.

Hakim Muradov1, Kimberly K Boyd, Nikolai O Artemyev.   

Abstract

cGMP-phosphodiesterases of the PDE6 family are expressed in retinal photoreceptor cells, where they mediate the phototransduction cascade. A system for expression of PDE6 in vitro is lacking, thus straining progress in understanding the structure-function relationships of the photoreceptor enzyme. Here, we report generation and characterization of bacterially expressed chimeric PDE5/6 catalytic domains which are highly soluble, catalytically active, and sensitive to inhibition by the PDE6 Pgamma subunit. Two flexible PDE6 loops, H and M, impart chimeric PDE5/6 catalytic domains with PDE6-like properties. The replacement of the PDE6 H-loop into the PDE5 catalytic domain increases the catalytic rate and the K(m) value for cGMP hydrolysis, whereas the substitution of the M-loop produces catalytic PDE domains responsive to Pgamma. Multiple PDE6 segments preventing functional expression of the catalytic domain are identified, supporting the requirement for specialized photoreceptor chaperones to assist PDE6 folding in vivo.

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Year:  2005        PMID: 16256165     DOI: 10.1016/j.visres.2005.09.015

Source DB:  PubMed          Journal:  Vision Res        ISSN: 0042-6989            Impact factor:   1.886


  16 in total

1.  Rod phosphodiesterase-6 PDE6A and PDE6B subunits are enzymatically equivalent.

Authors:  Hakim Muradov; Kimberly K Boyd; Nikolai O Artemyev
Journal:  J Biol Chem       Date:  2010-10-12       Impact factor: 5.157

2.  Intrinsically disordered gamma-subunit of cGMP phosphodiesterase encodes functionally relevant transient secondary and tertiary structure.

Authors:  Jikui Song; Lian-Wang Guo; Hakim Muradov; Nikolai O Artemyev; Arnold E Ruoho; John L Markley
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-29       Impact factor: 11.205

Review 3.  The retinal cGMP phosphodiesterase gamma-subunit - a chameleon.

Authors:  Lian-Wang Guo; Arnold E Ruoho
Journal:  Curr Protein Pept Sci       Date:  2008-12       Impact factor: 3.272

4.  Direct allosteric regulation between the GAF domain and catalytic domain of photoreceptor phosphodiesterase PDE6.

Authors:  Xiu-Jun Zhang; Karyn B Cahill; Arye Elfenbein; Vadim Y Arshavsky; Rick H Cote
Journal:  J Biol Chem       Date:  2008-09-08       Impact factor: 5.157

5.  AIPL1, a protein associated with childhood blindness, interacts with alpha-subunit of rod phosphodiesterase (PDE6) and is essential for its proper assembly.

Authors:  Saravanan Kolandaivelu; Jing Huang; James B Hurley; Visvanathan Ramamurthy
Journal:  J Biol Chem       Date:  2009-09-16       Impact factor: 5.157

6.  Structural basis of phosphodiesterase 6 inhibition by the C-terminal region of the gamma-subunit.

Authors:  Brandy Barren; Lokesh Gakhar; Hakim Muradov; Kimberly K Boyd; S Ramaswamy; Nikolai O Artemyev
Journal:  EMBO J       Date:  2009-10-01       Impact factor: 11.598

7.  Determinants for phosphodiesterase 6 inhibition by its gamma-subunit.

Authors:  Zhongming Zhang; Nikolai O Artemyev
Journal:  Biochemistry       Date:  2010-05-11       Impact factor: 3.162

8.  Catalytic Domains of Phosphodiesterase 5, 6, and 5/6 Chimera Display Differential Dynamics and Ligand Dissociation Energy Barriers.

Authors:  Jason G Pattis; Shaan Kamal; Boyang Li; Eric R May
Journal:  J Phys Chem B       Date:  2019-01-22       Impact factor: 2.991

9.  Identification of amino acid residues responsible for the selectivity of tadalafil binding to two closely related phosphodiesterases, PDE5 and PDE6.

Authors:  Karyn B Cahill; Jonathan H Quade; Karen L Carleton; Rick H Cote
Journal:  J Biol Chem       Date:  2012-10-02       Impact factor: 5.157

10.  Unique transducins expressed in long and short photoreceptors of lamprey Petromyzon marinus.

Authors:  Hakim Muradov; Vasily Kerov; Kimberly K Boyd; Nikolai O Artemyev
Journal:  Vision Res       Date:  2008-08-22       Impact factor: 1.886

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