Literature DB >> 20383125

Understanding amyloid aggregation by statistical analysis of atomic force microscopy images.

Jozef Adamcik1, Jin-Mi Jung, Jérôme Flakowski, Paolo De Los Rios, Giovanni Dietler, Raffaele Mezzenga.   

Abstract

The aggregation of proteins is central to many aspects of daily life, including food processing, blood coagulation, eye cataract formation disease and prion-related neurodegenerative infections. However, the physical mechanisms responsible for amyloidosis-the irreversible fibril formation of various proteins that is linked to disorders such as Alzheimer's, Creutzfeldt-Jakob and Huntington's diseases-have not yet been fully elucidated. Here, we show that different stages of amyloid aggregation can be examined by performing a statistical polymer physics analysis of single-molecule atomic force microscopy images of heat-denatured beta-lactoglobulin fibrils. The atomic force microscopy analysis, supported by theoretical arguments, reveals that the fibrils have a multistranded helical shape with twisted ribbon-like structures. Our results also indicate a possible general model for amyloid fibril assembly and illustrate the potential of this approach for investigating fibrillar systems.

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Year:  2010        PMID: 20383125     DOI: 10.1038/nnano.2010.59

Source DB:  PubMed          Journal:  Nat Nanotechnol        ISSN: 1748-3387            Impact factor:   39.213


  32 in total

1.  Ultrastructural organization of amyloid fibrils by atomic force microscopy.

Authors:  A K Chamberlain; C E MacPhee; J Zurdo; L A Morozova-Roche; H A Hill; C M Dobson; J J Davis
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

2.  Fine-stranded and particulate aggregates of heat-denatured whey proteins visualized by atomic force microscopy.

Authors:  Shinya Ikeda; Victor J Morris
Journal:  Biomacromolecules       Date:  2002 Mar-Apr       Impact factor: 6.988

3.  Multiple steps during the formation of beta-lactoglobulin fibrils.

Authors:  Luben N Arnaudov; Renko de Vries; Hans Ippel; Carlo P M van Mierlo
Journal:  Biomacromolecules       Date:  2003 Nov-Dec       Impact factor: 6.988

Review 4.  Protein folding and misfolding.

Authors:  Christopher M Dobson
Journal:  Nature       Date:  2003-12-18       Impact factor: 49.962

5.  A general model for amyloid fibril assembly based on morphological studies using atomic force microscopy.

Authors:  Ritu Khurana; Cristian Ionescu-Zanetti; Maighdlin Pope; Jie Li; Liza Nielson; Marina Ramírez-Alvarado; Lynn Regan; Anthony L Fink; Sue A Carter
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

6.  Equilibrium cluster formation in concentrated protein solutions and colloids.

Authors:  Anna Stradner; Helen Sedgwick; Frédéric Cardinaux; Wilson C K Poon; Stefan U Egelhaaf; Peter Schurtenberger
Journal:  Nature       Date:  2004-11-25       Impact factor: 49.962

7.  Mesoscopic properties of semiflexible amyloid fibrils.

Authors:  Leonard M C Sagis; Cecile Veerman; Erik van der Linden
Journal:  Langmuir       Date:  2004-02-03       Impact factor: 3.882

Review 8.  Understanding foods as soft materials.

Authors:  Raffaele Mezzenga; Peter Schurtenberger; Adam Burbidge; Martin Michel
Journal:  Nat Mater       Date:  2005-10       Impact factor: 43.841

Review 9.  Structural plasticity in actin and tubulin polymer dynamics.

Authors:  Hao Yuan Kueh; Timothy J Mitchison
Journal:  Science       Date:  2009-08-21       Impact factor: 47.728

10.  Role of intermolecular forces in defining material properties of protein nanofibrils.

Authors:  Tuomas P Knowles; Anthony W Fitzpatrick; Sarah Meehan; Helen R Mott; Michele Vendruscolo; Christopher M Dobson; Mark E Welland
Journal:  Science       Date:  2007-12-21       Impact factor: 47.728

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  84 in total

1.  Spontaneous formation of twisted Aβ(16-22) fibrils in large-scale molecular-dynamics simulations.

Authors:  Mookyung Cheon; Iksoo Chang; Carol K Hall
Journal:  Biophys J       Date:  2011-11-15       Impact factor: 4.033

2.  Single-particle characterization of Aβ oligomers in solution.

Authors:  Erik C Yusko; Panchika Prangkio; David Sept; Ryan C Rollings; Jiali Li; Michael Mayer
Journal:  ACS Nano       Date:  2012-06-21       Impact factor: 15.881

3.  Amyloid-carbon hybrid membranes for universal water purification.

Authors:  Sreenath Bolisetty; Raffaele Mezzenga
Journal:  Nat Nanotechnol       Date:  2016-01-25       Impact factor: 39.213

4.  An imaging and systems modeling approach to fibril breakage enables prediction of amyloid behavior.

Authors:  Wei-Feng Xue; Sheena E Radford
Journal:  Biophys J       Date:  2013-12-17       Impact factor: 4.033

5.  Non-equilibrium nature of two-dimensional isotropic and nematic coexistence in amyloid fibrils at liquid interfaces.

Authors:  Sophia Jordens; Lucio Isa; Ivan Usov; Raffaele Mezzenga
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  Surveying the Energy Landscapes of Aβ Fibril Polymorphism.

Authors:  Mingchen Chen; Nicholas P Schafer; Peter G Wolynes
Journal:  J Phys Chem B       Date:  2018-10-01       Impact factor: 2.991

7.  Sulfate anion delays the self-assembly of human insulin by modifying the aggregation pathway.

Authors:  Marta Owczarz; Paolo Arosio
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

8.  Nanoscale Pulling of Type IV Pili Reveals Their Flexibility and Adhesion to Surfaces over Extended Lengths of the Pili.

Authors:  Shun Lu; Maximiliano Giuliani; Hanjeong Harvey; Lori L Burrows; Robert A Wickham; John R Dutcher
Journal:  Biophys J       Date:  2015-06-16       Impact factor: 4.033

9.  Nanoscale inhibition of polymorphic and ambidextrous IAPP amyloid aggregation with small molecules.

Authors:  Aleksandr Kakinen; Jozef Adamcik; Bo Wang; Xinwei Ge; Raffaele Mezzenga; Thomas P Davis; Feng Ding; Pu Chun Ke
Journal:  Nano Res       Date:  2018-08-02       Impact factor: 8.897

10.  Amyloid fibril systems reduce, stabilize and deliver bioavailable nanosized iron.

Authors:  Yi Shen; Lidija Posavec; Sreenath Bolisetty; Florentine M Hilty; Gustav Nyström; Joachim Kohlbrecher; Monika Hilbe; Antonella Rossi; Jeannine Baumgartner; Michael B Zimmermann; Raffaele Mezzenga
Journal:  Nat Nanotechnol       Date:  2017-04-24       Impact factor: 39.213

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