Literature DB >> 22686709

Single-particle characterization of Aβ oligomers in solution.

Erik C Yusko1, Panchika Prangkio, David Sept, Ryan C Rollings, Jiali Li, Michael Mayer.   

Abstract

Determining the pathological role of amyloids in amyloid-associated diseases will require a method for characterizing the dynamic distributions in size and shape of amyloid oligomers with high resolution. Here, we explored the potential of resistive-pulse sensing through lipid bilayer-coated nanopores to measure the size of individual amyloid-β oligomers directly in solution and without chemical modification. This method classified individual amyloid-β aggregates as spherical oligomers, protofibrils, or mature fibers and made it possible to account for the large heterogeneity of amyloid-β aggregate sizes. The approach revealed the distribution of protofibrillar lengths (12- to 155 -mer) as well as the average cross-sectional area of protofibrils and fibers.

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Year:  2012        PMID: 22686709      PMCID: PMC3418869          DOI: 10.1021/nn300542q

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  81 in total

1.  Amyloid beta-protein fibrillogenesis. Structure and biological activity of protofibrillar intermediates.

Authors:  D M Walsh; D M Hartley; Y Kusumoto; Y Fezoui; M M Condron; A Lomakin; G B Benedek; D J Selkoe; D B Teplow
Journal:  J Biol Chem       Date:  1999-09-03       Impact factor: 5.157

2.  Ion-beam sculpting at nanometre length scales.

Authors:  J Li; D Stein; C McMullan; D Branton; M J Aziz; J A Golovchenko
Journal:  Nature       Date:  2001-07-12       Impact factor: 49.962

Review 3.  Alzheimer's disease pathogenesis and therapeutic interventions.

Authors:  M S Parihar; Taruna Hemnani
Journal:  J Clin Neurosci       Date:  2004-06       Impact factor: 1.961

4.  An adsorption-based model for pulse duration in resistive-pulse protein sensing.

Authors:  Lindsay T Sexton; Hitomi Mukaibo; Parag Katira; Henry Hess; Stefanie A Sherrill; Lloyd P Horne; Charles R Martin
Journal:  J Am Chem Soc       Date:  2010-05-19       Impact factor: 15.419

5.  Label-free affinity assays by rapid detection of immune complexes in submicrometer pores.

Authors:  Jeffrey D Uram; Kevin Ke; Alan J Hunt; Michael Mayer
Journal:  Angew Chem Int Ed Engl       Date:  2006-03-27       Impact factor: 15.336

6.  The aggregation kinetics of Alzheimer's beta-amyloid peptide is controlled by stochastic nucleation.

Authors:  Peter Hortschansky; Volker Schroeckh; Tony Christopeit; Giorgia Zandomeneghi; Marcus Fändrich
Journal:  Protein Sci       Date:  2005-06-03       Impact factor: 6.725

Review 7.  Alzheimer's disease.

Authors:  Henry W Querfurth; Frank M LaFerla
Journal:  N Engl J Med       Date:  2010-01-28       Impact factor: 91.245

8.  Amyloid β1-42 oligomer inhibits myelin sheet formation in vitro.

Authors:  Makoto Horiuchi; Izumi Maezawa; Aki Itoh; Kouji Wakayama; Lee-Way Jin; Takayuki Itoh; Charles Decarli
Journal:  Neurobiol Aging       Date:  2010-07-01       Impact factor: 4.673

9.  Neurotoxic protein oligomers--what you see is not always what you get.

Authors:  Gal Bitan; Erica A Fradinger; Sean M Spring; David B Teplow
Journal:  Amyloid       Date:  2005-06       Impact factor: 7.141

10.  Amyloid-beta-induced ion flux in artificial lipid bilayers and neuronal cells: resolving a controversy.

Authors:  Ricardo Capone; Felipe Garcia Quiroz; Panchika Prangkio; Inderjeet Saluja; Anna M Sauer; Mahealani R Bautista; Raymond S Turner; Jerry Yang; Michael Mayer
Journal:  Neurotox Res       Date:  2009-03-19       Impact factor: 3.911

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  21 in total

1.  Fingerprinting of Peptides with a Large Channel of Bacteriophage Phi29 DNA Packaging Motor.

Authors:  Zhouxiang Ji; Shaoying Wang; Zhengyi Zhao; Zhi Zhou; Farzin Haque; Peixuan Guo
Journal:  Small       Date:  2016-07-20       Impact factor: 13.281

2.  Direct Sensing and Discrimination among Ubiquitin and Ubiquitin Chains Using Solid-State Nanopores.

Authors:  Iftach Nir; Diana Huttner; Amit Meller
Journal:  Biophys J       Date:  2015-05-05       Impact factor: 4.033

3.  Real-time shape approximation and fingerprinting of single proteins using a nanopore.

Authors:  Erik C Yusko; Brandon R Bruhn; Olivia M Eggenberger; Jared Houghtaling; Ryan C Rollings; Nathan C Walsh; Santoshi Nandivada; Mariya Pindrus; Adam R Hall; David Sept; Jiali Li; Devendra S Kalonia; Michael Mayer
Journal:  Nat Nanotechnol       Date:  2016-12-19       Impact factor: 39.213

4.  Electrostatic Interactions between OmpG Nanopore and Analyte Protein Surface Can Distinguish between Glycosylated Isoforms.

Authors:  Monifa A Fahie; Min Chen
Journal:  J Phys Chem B       Date:  2015-07-30       Impact factor: 2.991

5.  High-bandwidth protein analysis using solid-state nanopores.

Authors:  Joseph Larkin; Robert Y Henley; Murugappan Muthukumar; Jacob K Rosenstein; Meni Wanunu
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

6.  DNA motion induced by electrokinetic flow near an Au coated nanopore surface as voltage controlled gate.

Authors:  Manabu Sugimoto; Yuta Kato; Kentaro Ishida; Changbae Hyun; Jiali Li; Toshiyuki Mitsui
Journal:  Nanotechnology       Date:  2015-01-22       Impact factor: 3.874

Review 7.  Localized Nanopore Fabrication via Controlled Breakdown.

Authors:  Cuifeng Ying; Tianji Ma; Lei Xu; Mohsen Rahmani
Journal:  Nanomaterials (Basel)       Date:  2022-07-12       Impact factor: 5.719

Review 8.  Characterization of protein unfolding with solid-state nanopores.

Authors:  Jiali Li; Daniel Fologea; Ryan Rollings; Brad Ledden
Journal:  Protein Pept Lett       Date:  2014-03       Impact factor: 1.890

9.  Ionic conductivity, structural deformation, and programmable anisotropy of DNA origami in electric field.

Authors:  Chen-Yu Li; Elisa A Hemmig; Jinglin Kong; Jejoong Yoo; Silvia Hernández-Ainsa; Ulrich F Keyser; Aleksei Aksimentiev
Journal:  ACS Nano       Date:  2015-01-30       Impact factor: 15.881

10.  Single-molecule nanopore sensing of actin dynamics and drug binding.

Authors:  Xiaoyi Wang; Mark D Wilkinson; Xiaoyan Lin; Ren Ren; Keith R Willison; Aleksandar P Ivanov; Jake Baum; Joshua B Edel
Journal:  Chem Sci       Date:  2019-12-03       Impact factor: 9.825

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