Literature DB >> 20382784

Sphingomonas glacialis sp. nov., a psychrophilic bacterium isolated from alpine glacier cryoconite.

De-Chao Zhang1, Hans-Jürgen Busse2, Hong-Can Liu3, Yu-Guang Zhou3, Franz Schinner1, Rosa Margesin1.   

Abstract

A non-motile, rod-shaped, yellow bacterium, designated C16y(T), was isolated from alpine glacier cryoconite. Cells behaved Gram-positively, were aerobic and psychrophilic (good growth at 1-25 °C). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain C16y(T) was related to the genus Sphingomonas and had highest 16S rRNA gene sequence similarity with Sphingomonas oligophenolica JCM 12082(T) (97.6  %) and Sphingomonas echinoides DSM 1805(T) (97.2  %). DNA-DNA hybridization demonstrated that strain C16y(T) could not be considered as a member of either Sphingomonas oligophenolica or Sphingomonas echinoides. Strain C16y(T) contained Q-10 as the predominant ubiquinone and C₁₈:₁ and C₁₆:₀ were the dominant fatty acids. The polar lipid profile contained phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, sphingoglycolipid, five unidentified glycolipids, two unidentified aminophospholipids and two unidentified lipids. The major polyamines were the triamines sym-homospermidine and spermidine. The G+C content was 67.9 mol%. Combined data from phenotypic, phylogenetic and DNA-DNA relatedness studies demonstrated that strain C16y(T) is a representative of a novel species of the genus Sphingomonas, for which we propose the name Sphingomonas glacialis sp. nov. The type strain is C16y(T) (=DSM 22294(T) =CGMCC 1.8957(T) =CIP 110131(T) [corrected]).

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Year:  2010        PMID: 20382784     DOI: 10.1099/ijs.0.023135-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

1.  Culturable bacterial communities on leaf sheaths and panicles of rice plants in Japan.

Authors:  Hirosuke Shinohara; Shigenobu Yoshida; Junichiro Enya; Yuriko Watanabe; Takao Tsukiboshi; Hiromitsu Negishi; Seiya Tsushima
Journal:  Folia Microbiol (Praha)       Date:  2011-11-15       Impact factor: 2.099

2.  Sphingomonas rosea sp. nov. and Sphingomonas swuensis sp. nov., rosy colored β-glucosidase-producing bacteria isolated from soil.

Authors:  Sathiyaraj Srinivasan; Jae-Jin Lee; Myung Kyum Kim
Journal:  J Microbiol       Date:  2011-09-02       Impact factor: 3.422

3.  Characterization of growing bacterial populations in McMurdo Dry Valley soils through stable isotope probing with (18) O-water.

Authors:  Egbert Schwartz; David J Van Horn; Heather N Buelow; Jordan G Okie; Michael N Gooseff; John E Barrett; Cristina D Takacs-Vesbach
Journal:  FEMS Microbiol Ecol       Date:  2014-05-22       Impact factor: 4.194

4.  Sphingomonas qilianensis sp. nov., Isolated from Surface Soil in the Permafrost Region of Qilian Mountains, China.

Authors:  Ai-Lian Piao; Xiao-Min Feng; Yuichi Nogi; Lu Han; Yonghong Li; Jie Lv
Journal:  Curr Microbiol       Date:  2015-12-17       Impact factor: 2.188

5.  Glacier ice archives nearly 15,000-year-old microbes and phages.

Authors:  Zhi-Ping Zhong; Funing Tian; Simon Roux; M Consuelo Gazitúa; Natalie E Solonenko; Yueh-Fen Li; Mary E Davis; James L Van Etten; Ellen Mosley-Thompson; Virginia I Rich; Matthew B Sullivan; Lonnie G Thompson
Journal:  Microbiome       Date:  2021-07-20       Impact factor: 14.650

6.  Recovery of metallo-tolerant and antibiotic resistant psychrophilic bacteria from Siachen glacier, Pakistan.

Authors:  Muhammad Rafiq; Muhammad Hayat; Alexandre M Anesio; Syed Umair Ullah Jamil; Noor Hassan; Aamer Ali Shah; Fariha Hasan
Journal:  PLoS One       Date:  2017-07-26       Impact factor: 3.240

  6 in total

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