Literature DB >> 21887644

Sphingomonas rosea sp. nov. and Sphingomonas swuensis sp. nov., rosy colored β-glucosidase-producing bacteria isolated from soil.

Sathiyaraj Srinivasan1, Jae-Jin Lee, Myung Kyum Kim.   

Abstract

Two strains PB196(T) and PB62(T) of Gram-negative, non-motile, and non-spore-forming bacteria, were isolated from soil in South Korea and characterized to determine their taxonomic positions. 16S rRNA gene sequence analysis showed that the two strains belonged to the genus Sphingomonas. The highest degree of sequence similarity of strain PB196(T) was found with PB62(T) (98.9%), Sphingomonas humi PB323(T) (98.9%), Sphingomonas kaistensis PB56(T) (98.2%), and Sphingomonas astaxanthinifaciens TDMA-17(T) (98.0%). The highest degree of sequence similarity of strain PB62(T) was found with Sphingomonas humi PB323(T) (98.8%), Sphingomonas astaxanthinifaciens TDMA-17(T) (98.2%), and Sphingomonas kaistensis PB56(T) (98.1%). Chemotaxonomic data revealed that they possessed ubiquinone-10 (Q-10) as common in the genus Sphingomonas, that the predominant fatty acids were summed feature 7 (C(18:1) ω7c/ω9t/ω12t), summed feature 4 (C(16:1) ω7c/C(15:0) iso 2OH), C(16:0), and C(17:1) ω6c, and that they contained sphingoglycolipid, phosphatidylglycerol (PG), and phosphatidyle-thanolamine (PE) in common but they showed difference for diphosphatidylglycerol (DPG). Based on these data, PB196(T) (=KCTC 12339(T) =JCM 16604(T)) and PB62(T) (=KCTC 12336(T) =JCM 16605(T) =KEMB 9004-005(T)) should be classified as type strains of two novel species, for which the names Sphingomonas rosea sp. nov. and Sphingomonas swuensis sp. nov. are proposed, respectively.

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Year:  2011        PMID: 21887644     DOI: 10.1007/s12275-011-1017-1

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  24 in total

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2.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

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Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

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Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

4.  Sphingomonas glacialis sp. nov., a psychrophilic bacterium isolated from alpine glacier cryoconite.

Authors:  De-Chao Zhang; Hans-Jürgen Busse; Hong-Can Liu; Yu-Guang Zhou; Franz Schinner; Rosa Margesin
Journal:  Int J Syst Evol Microbiol       Date:  2010-04-09       Impact factor: 2.747

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Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

Review 6.  Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication.

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Journal:  Microbiol Rev       Date:  1981-06

7.  Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses.

Authors:  M Takeuchi; K Hamana; A Hiraishi
Journal:  Int J Syst Evol Microbiol       Date:  2001-07       Impact factor: 2.747

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Authors:  H-J Busse; P Kämpfer; E B M Denner
Journal:  J Ind Microbiol Biotechnol       Date:  1999-10       Impact factor: 3.346

9.  Sphingomonas astaxanthinifaciens sp. nov., a novel astaxanthin-producing bacterium of the family Sphingomonadaceae isolated from Misasa, Tottori, Japan.

Authors:  Dalal Asker; Teruhiko Beppu; Kenji Ueda
Journal:  FEMS Microbiol Lett       Date:  2007-06-22       Impact factor: 2.742

10.  Sphingomonas kaistensis sp. nov., a novel alphaproteobacterium containing pufLM genes.

Authors:  Myung Kyum Kim; Karin Schubert; Wan-Taek Im; Kyung-Ho Kim; Sung-Taik Lee; Jörg Overmann
Journal:  Int J Syst Evol Microbiol       Date:  2007-07       Impact factor: 2.747

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  1 in total

1.  Phylogenetically Diverse Aerobic Anoxygenic Phototrophic Bacteria Isolated from Epilithic Biofilms in Tama River, Japan.

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Journal:  Microbes Environ       Date:  2016-07-23       Impact factor: 2.912

  1 in total

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