Literature DB >> 20381335

Targeting X chromosomes for repression.

Barbara J Meyer1.   

Abstract

Dosage compensation is a chromosome-wide regulatory process that balances X-chromosome gene expression between males and females that have different complements. Recent advances have clarified the molecular nature of the Caenorhabditis elegans sex-determination signal, which tallies X-chromosome number relative to the ploidy and controls both the choice of sexual fate and the process of dosage compensation. Dissecting the sex signal has revealed molecular mechanisms by which small quantitative differences in intracellular signals are translated into dramatically different developmental fates. Recent experiments have also revealed fundamental principles by which C. elegans dosage compensation proteins recognize and bind X chromosomes of XX embryos to reduce gene expression. Dosage compensation proteins function not only in a condensin complex specialized for regulating X-chromosome gene expression, but also in distinct condensin complexes that control other chromosome-wide processes: chromosome segregation and meiotic crossover recombination. The reshuffling of interchangeable molecular parts creates independent machines with similar architecture but distinct biological functions. 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20381335      PMCID: PMC2906122          DOI: 10.1016/j.gde.2010.03.008

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  69 in total

1.  A molecular link between gene-specific and chromosome-wide transcriptional repression.

Authors:  Diana S Chu; Heather E Dawes; Jason D Lieb; Raymond C Chan; Annie F Kuo; Barbara J Meyer
Journal:  Genes Dev       Date:  2002-04-01       Impact factor: 11.361

Review 2.  C. elegans dosage compensation: a window into mechanisms of domain-scale gene regulation.

Authors:  Sevinc Ercan; Jason D Lieb
Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

3.  Genome-wide analysis reveals MOF as a key regulator of dosage compensation and gene expression in Drosophila.

Authors:  Jop Kind; Juan M Vaquerizas; Philipp Gebhardt; Marc Gentzel; Nicholas M Luscombe; Paul Bertone; Asifa Akhtar
Journal:  Cell       Date:  2008-05-30       Impact factor: 41.582

4.  An extracellular activator of the Drosophila JAK/STAT pathway is a sex-determination signal element.

Authors:  L Sefton; J R Timmer; Y Zhang; F Béranger; T W Cline
Journal:  Nature       Date:  2000-06-22       Impact factor: 49.962

5.  xol-1: a gene that controls the male modes of both sex determination and X chromosome dosage compensation in C. elegans.

Authors:  L M Miller; J D Plenefisch; L P Casson; B J Meyer
Journal:  Cell       Date:  1988-10-07       Impact factor: 41.582

6.  Evidence that sisterless-a and sisterless-b are two of several discrete "numerator elements" of the X/A sex determination signal in Drosophila that switch Sxl between two alternative stable expression states.

Authors:  T W Cline
Journal:  Genetics       Date:  1988-08       Impact factor: 4.562

7.  Chromosome-wide gene-specific targeting of the Drosophila dosage compensation complex.

Authors:  Gregor D Gilfillan; Tobias Straub; Elzo de Wit; Frauke Greil; Rosemarie Lamm; Bas van Steensel; Peter B Becker
Journal:  Genes Dev       Date:  2006-03-17       Impact factor: 11.361

8.  The C. elegans dosage compensation complex propagates dynamically and independently of X chromosome sequence.

Authors:  Sevinç Ercan; Lindsay L Dick; Jason D Lieb
Journal:  Curr Biol       Date:  2009-10-22       Impact factor: 10.834

9.  A bZIP protein, sisterless-a, collaborates with bHLH transcription factors early in Drosophila development to determine sex.

Authors:  J W Erickson; T W Cline
Journal:  Genes Dev       Date:  1993-09       Impact factor: 11.361

10.  A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome.

Authors:  Artyom A Alekseyenko; Shouyong Peng; Erica Larschan; Andrey A Gorchakov; Ok-Kyung Lee; Peter Kharchenko; Sean D McGrath; Charlotte I Wang; Elaine R Mardis; Peter J Park; Mitzi I Kuroda
Journal:  Cell       Date:  2008-08-22       Impact factor: 41.582

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  73 in total

Review 1.  Condensin and cohesin complexity: the expanding repertoire of functions.

Authors:  Andrew J Wood; Aaron F Severson; Barbara J Meyer
Journal:  Nat Rev Genet       Date:  2010-05-05       Impact factor: 53.242

2.  Broad chromosomal domains of histone modification patterns in C. elegans.

Authors:  Tao Liu; Andreas Rechtsteiner; Thea A Egelhofer; Anne Vielle; Isabel Latorre; Ming-Sin Cheung; Sevinc Ercan; Kohta Ikegami; Morten Jensen; Paulina Kolasinska-Zwierz; Heidi Rosenbaum; Hyunjin Shin; Scott Taing; Teruaki Takasaki; A Leonardo Iniguez; Arshad Desai; Abby F Dernburg; Hiroshi Kimura; Jason D Lieb; Julie Ahringer; Susan Strome; X Shirley Liu
Journal:  Genome Res       Date:  2010-12-22       Impact factor: 9.043

3.  Jpx RNA activates Xist by evicting CTCF.

Authors:  Sha Sun; Brian C Del Rosario; Attila Szanto; Yuya Ogawa; Yesu Jeon; Jeannie T Lee
Journal:  Cell       Date:  2013-06-20       Impact factor: 41.582

4.  SUMOylation is essential for sex-specific assembly and function of the Caenorhabditis elegans dosage compensation complex on X chromosomes.

Authors:  Rebecca R Pferdehirt; Barbara J Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

Review 5.  Transcriptional regulation of gene expression in C. elegans.

Authors:  Valerie Reinke; Michael Krause; Peter Okkema
Journal:  WormBook       Date:  2013-06-04

Review 6.  Cell Biology of the Caenorhabditis elegans Nucleus.

Authors:  Orna Cohen-Fix; Peter Askjaer
Journal:  Genetics       Date:  2017-01       Impact factor: 4.562

7.  Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster.

Authors:  Xinxian Deng; Joseph B Hiatt; Di Kim Nguyen; Sevinc Ercan; David Sturgill; LaDeana W Hillier; Felix Schlesinger; Carrie A Davis; Valerie J Reinke; Thomas R Gingeras; Jay Shendure; Robert H Waterston; Brian Oliver; Jason D Lieb; Christine M Disteche
Journal:  Nat Genet       Date:  2011-10-23       Impact factor: 38.330

8.  Chromosome-wide mechanisms to decouple gene expression from gene dose during sex-chromosome evolution.

Authors:  Bayly S Wheeler; Erika Anderson; Christian Frøkjær-Jensen; Qian Bian; Erik Jorgensen; Barbara J Meyer
Journal:  Elife       Date:  2016-08-30       Impact factor: 8.140

9.  Dynamic Control of X Chromosome Conformation and Repression by a Histone H4K20 Demethylase.

Authors:  Katjuša Brejc; Qian Bian; Satoru Uzawa; Bayly S Wheeler; Erika C Anderson; David S King; Philip J Kranzusch; Christine G Preston; Barbara J Meyer
Journal:  Cell       Date:  2017-08-31       Impact factor: 41.582

10.  Mammalian X upregulation is associated with enhanced transcription initiation, RNA half-life, and MOF-mediated H4K16 acetylation.

Authors:  Xinxian Deng; Joel B Berletch; Wenxiu Ma; Di Kim Nguyen; Joseph B Hiatt; William S Noble; Jay Shendure; Christine M Disteche
Journal:  Dev Cell       Date:  2013-03-21       Impact factor: 12.270

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