Literature DB >> 20368463

High-resolution x-ray diffraction microscopy of specifically labeled yeast cells.

Johanna Nelson1, Xiaojing Huang, Jan Steinbrener, David Shapiro, Janos Kirz, Stefano Marchesini, Aaron M Neiman, Joshua J Turner, Chris Jacobsen.   

Abstract

X-ray diffraction microscopy complements other x-ray microscopy methods by being free of lens-imposed radiation dose and resolution limits, and it allows for high-resolution imaging of biological specimens too thick to be viewed by electron microscopy. We report here the highest resolution (11-13 nm) x-ray diffraction micrograph of biological specimens, and a demonstration of molecular-specific gold labeling at different depths within cells via through-focus propagation of the reconstructed wavefield. The lectin concanavalin A conjugated to colloidal gold particles was used to label the alpha-mannan sugar in the cell wall of the yeast Saccharomyces cerevisiae. Cells were plunge-frozen in liquid ethane and freeze-dried, after which they were imaged whole using x-ray diffraction microscopy at 750 eV photon energy.

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Year:  2010        PMID: 20368463      PMCID: PMC2867732          DOI: 10.1073/pnas.0910874107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Compact water-window transmission X-ray microscopy.

Authors:  M Berglund; L Rymell; M Peuker; T Wilhein; H M Hertz
Journal:  J Microsc       Date:  2000-03       Impact factor: 1.758

2.  Imaging whole Escherichia coli bacteria by using single-particle x-ray diffraction.

Authors:  Jianwei Miao; Keith O Hodgson; Tetsuya Ishikawa; Carolyn A Larabell; Mark A LeGros; Yoshinori Nishino
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-23       Impact factor: 11.205

3.  Diffractive imaging of nonperiodic materials with future coherent X-ray sources.

Authors:  Qun Shen; Ivan Bazarov; Pierre Thibault
Journal:  J Synchrotron Radiat       Date:  2004-08-17       Impact factor: 2.616

4.  Soft X-ray microscopy at a spatial resolution better than 15 nm.

Authors:  Weilun Chao; Bruce D Harteneck; J Alexander Liddle; Erik H Anderson; David T Attwood
Journal:  Nature       Date:  2005-06-30       Impact factor: 49.962

Review 5.  X-ray fluorescence microprobe imaging in biology and medicine.

Authors:  Tatjana Paunesku; Stefan Vogt; Jörg Maser; Barry Lai; Gayle Woloschak
Journal:  J Cell Biochem       Date:  2006-12-15       Impact factor: 4.429

Review 6.  Biological applications of X-ray fluorescence microscopy: exploring the subcellular topography and speciation of transition metals.

Authors:  Christoph J Fahrni
Journal:  Curr Opin Chem Biol       Date:  2007-03-13       Impact factor: 8.822

7.  Coherent x-ray diffraction imaging with nanofocused illumination.

Authors:  C G Schroer; P Boye; J M Feldkamp; J Patommel; A Schropp; A Schwab; S Stephan; M Burghammer; S Schöder; C Riekel
Journal:  Phys Rev Lett       Date:  2008-08-29       Impact factor: 9.161

8.  Energy filtered electron tomography of ice-embedded actin and vesicles.

Authors:  R Grimm; M Bärmann; W Häckl; D Typke; E Sackmann; W Baumeister
Journal:  Biophys J       Date:  1997-01       Impact factor: 4.033

9.  X-ray tomography generates 3-D reconstructions of the yeast, saccharomyces cerevisiae, at 60-nm resolution.

Authors:  Carolyn A Larabell; Mark A Le Gros
Journal:  Mol Biol Cell       Date:  2003-12-29       Impact factor: 4.138

10.  Specific staining of wall mannan in yeast cells with fluorescein-conjugated concanavalin A.

Authors:  J S Tkacz; E B Cybulska; J O Lampen
Journal:  J Bacteriol       Date:  1971-01       Impact factor: 3.490

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  22 in total

1.  Simultaneous cryo X-ray ptychographic and fluorescence microscopy of green algae.

Authors:  Junjing Deng; David J Vine; Si Chen; Youssef S G Nashed; Qiaoling Jin; Nicholas W Phillips; Tom Peterka; Rob Ross; Stefan Vogt; Chris J Jacobsen
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-09       Impact factor: 11.205

2.  X-ray-Based Techniques to Study the Nano-Bio Interface.

Authors:  Carlos Sanchez-Cano; Ramon A Alvarez-Puebla; John M Abendroth; Tobias Beck; Robert Blick; Yuan Cao; Frank Caruso; Indranath Chakraborty; Henry N Chapman; Chunying Chen; Bruce E Cohen; Andre L C Conceição; David P Cormode; Daxiang Cui; Kenneth A Dawson; Gerald Falkenberg; Chunhai Fan; Neus Feliu; Mingyuan Gao; Elisabetta Gargioni; Claus-C Glüer; Florian Grüner; Moustapha Hassan; Yong Hu; Yalan Huang; Samuel Huber; Nils Huse; Yanan Kang; Ali Khademhosseini; Thomas F Keller; Christian Körnig; Nicholas A Kotov; Dorota Koziej; Xing-Jie Liang; Beibei Liu; Sijin Liu; Yang Liu; Ziyao Liu; Luis M Liz-Marzán; Xiaowei Ma; Andres Machicote; Wolfgang Maison; Adrian P Mancuso; Saad Megahed; Bert Nickel; Ferdinand Otto; Cristina Palencia; Sakura Pascarelli; Arwen Pearson; Oula Peñate-Medina; Bing Qi; Joachim Rädler; Joseph J Richardson; Axel Rosenhahn; Kai Rothkamm; Michael Rübhausen; Milan K Sanyal; Raymond E Schaak; Heinz-Peter Schlemmer; Marius Schmidt; Oliver Schmutzler; Theo Schotten; Florian Schulz; A K Sood; Kathryn M Spiers; Theresa Staufer; Dominik M Stemer; Andreas Stierle; Xing Sun; Gohar Tsakanova; Paul S Weiss; Horst Weller; Fabian Westermeier; Ming Xu; Huijie Yan; Yuan Zeng; Ying Zhao; Yuliang Zhao; Dingcheng Zhu; Ying Zhu; Wolfgang J Parak
Journal:  ACS Nano       Date:  2021-03-02       Impact factor: 15.881

Review 3.  Correlative cryogenic tomography of cells using light and soft x-rays.

Authors:  Elizabeth A Smith; Bertrand P Cinquin; Myan Do; Gerry McDermott; Mark A Le Gros; Carolyn A Larabell
Journal:  Ultramicroscopy       Date:  2013-11-07       Impact factor: 2.689

4.  Identification of Ca-rich dense granules in human platelets using scanning transmission X-ray microscopy.

Authors:  Tung X Trinh; Sook Jin Kwon; Zayakhuu Gerelkhuu; Jang Sik Choi; Jaewoo Song; Tae Hyun Yoon
Journal:  J Synchrotron Radiat       Date:  2020-03-16       Impact factor: 2.616

Review 5.  Imaging cellular architecture with X-rays.

Authors:  Carolyn A Larabell; Keith A Nugent
Journal:  Curr Opin Struct Biol       Date:  2010-09-24       Impact factor: 6.809

6.  Anti-contamination device for cryogenic soft X-ray diffraction microscopy.

Authors:  Xiaojing Huang; Huijie Miao; Johanna Nelson; Joshua Turner; Jan Steinbrener; David Shapiro; Janos Kirz; Chris Jacobsen
Journal:  Nucl Instrum Methods Phys Res A       Date:  2011-05-11       Impact factor: 1.455

7.  Data preparation and evaluation techniques for x-ray diffraction microscopy.

Authors:  Jan Steinbrener; Johanna Nelson; Xiaojing Huang; Stefano Marchesini; David Shapiro; Joshua J Turner; Chris Jacobsen
Journal:  Opt Express       Date:  2010-08-30       Impact factor: 3.894

8.  Low-dose shift- and rotation-invariant diffraction recognition imaging.

Authors:  Tatiana Latychevskaia; Alice Kohli
Journal:  Sci Rep       Date:  2022-07-01       Impact factor: 4.996

9.  Oversampling smoothness: an effective algorithm for phase retrieval of noisy diffraction intensities.

Authors:  Jose A Rodriguez; Rui Xu; Chien-Chun Chen; Yunfei Zou; Jianwei Miao
Journal:  J Appl Crystallogr       Date:  2013-02-23       Impact factor: 3.304

10.  Coherent diffraction microscopy at SPring-8: instrumentation, data acquisition and data analysis.

Authors:  Rui Xu; Sara Salha; Kevin S Raines; Huaidong Jiang; Chien Chun Chen; Yukio Takahashi; Yoshiki Kohmura; Yoshinori Nishino; Changyong Song; Tetsuya Ishikawa; Jianwei Miao
Journal:  J Synchrotron Radiat       Date:  2011-01-21       Impact factor: 2.616

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