Literature DB >> 20368362

DDB2 complex-mediated ubiquitylation around DNA damage is oppositely regulated by XPC and Ku and contributes to the recruitment of XPA.

Arato Takedachi1, Masafumi Saijo, Kiyoji Tanaka.   

Abstract

UV-damaged-DNA-binding protein (UV-DDB) is a heterodimer comprised of DDB1 and DDB2 and integrated in a complex that includes a ubiquitin ligase component, cullin 4A, and Roc1. Here we show that the ubiquitin ligase activity of the DDB2 complex is required for efficient global genome nucleotide excision repair (GG-NER) in chromatin. Mutant DDB2 proteins derived from xeroderma pigmentosum group E patients are not able to mediate ubiquitylation around damaged sites in chromatin. We also found that CSN, a negative regulator of cullin-based ubiquitin ligases, dissociates from the DDB2 complex when the complex binds to damaged DNA and that XPC and Ku oppositely regulate the ubiquitin ligase activity, especially around damaged sites. Furthermore, the DDB2 complex-mediated ubiquitylation plays a role in recruiting XPA to damaged sites. These findings shed some light on the early stages of GG-NER.

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Year:  2010        PMID: 20368362      PMCID: PMC2876528          DOI: 10.1128/MCB.01460-09

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  61 in total

1.  Ku acts in a unique way at the mammalian telomere to prevent end joining.

Authors:  H L Hsu; D Gilley; S A Galande; M P Hande; B Allen; S H Kim; G C Li; J Campisi; T Kohwi-Shigematsu; D J Chen
Journal:  Genes Dev       Date:  2000-11-15       Impact factor: 11.361

2.  UV-DDB-dependent regulation of nucleotide excision repair kinetics in living cells.

Authors:  Ryotaro Nishi; Sergey Alekseev; Christoffel Dinant; Deborah Hoogstraten; Adriaan B Houtsmuller; Jan H J Hoeijmakers; Wim Vermeulen; Fumio Hanaoka; Kaoru Sugasawa
Journal:  DNA Repair (Amst)       Date:  2009-03-21

3.  Reinvestigation of the classification of five cell strains of xeroderma pigmentosum group E with reclassification of three of them.

Authors:  T Itoh; S Linn; T Ono; M Yamaizumi
Journal:  J Invest Dermatol       Date:  2000-05       Impact factor: 8.551

4.  Stable binding of human XPC complex to irradiated DNA confers strong discrimination for damaged sites.

Authors:  D Batty; V Rapic'-Otrin; A S Levine; R D Wood
Journal:  J Mol Biol       Date:  2000-07-07       Impact factor: 5.469

5.  DNA double-strand break repair proteins are required to cap the ends of mammalian chromosomes.

Authors:  S M Bailey; J Meyne; D J Chen; A Kurimasa; G C Li; B E Lehnert; E H Goodwin
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

6.  Nucleotide excision repair of DNA with recombinant human proteins: definition of the minimal set of factors, active forms of TFIIH, and modulation by CAK.

Authors:  S J Araújo; F Tirode; F Coin; H Pospiech; J E Syväoja; M Stucki; U Hübscher; J M Egly; R D Wood
Journal:  Genes Dev       Date:  2000-02-01       Impact factor: 11.361

7.  Human DNA repair genes.

Authors:  R D Wood; M Mitchell; J Sgouros; T Lindahl
Journal:  Science       Date:  2001-02-16       Impact factor: 47.728

8.  Comparative analysis of binding of human damaged DNA-binding protein (XPE) and Escherichia coli damage recognition protein (UvrA) to the major ultraviolet photoproducts: T[c,s]T, T[t,s]T, T[6-4]T, and T[Dewar]T.

Authors:  J T Reardon; A F Nichols; S Keeney; C A Smith; J S Taylor; S Linn; A Sancar
Journal:  J Biol Chem       Date:  1993-10-05       Impact factor: 5.157

9.  Correction of the DNA repair defect in xeroderma pigmentosum group E by injection of a DNA damage-binding protein.

Authors:  S Keeney; A P Eker; T Brody; W Vermeulen; D Bootsma; J H Hoeijmakers; S Linn
Journal:  Proc Natl Acad Sci U S A       Date:  1994-04-26       Impact factor: 11.205

10.  RAD50 protein of S.cerevisiae exhibits ATP-dependent DNA binding.

Authors:  W E Raymond; N Kleckner
Journal:  Nucleic Acids Res       Date:  1993-08-11       Impact factor: 16.971

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  29 in total

1.  Single-molecule analysis reveals human UV-damaged DNA-binding protein (UV-DDB) dimerizes on DNA via multiple kinetic intermediates.

Authors:  Harshad Ghodke; Hong Wang; Ching L Hsieh; Selamawit Woldemeskel; Simon C Watkins; Vesna Rapić-Otrin; Bennett Van Houten
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-23       Impact factor: 11.205

2.  Coordination of cell cycle, DNA repair and muscle gene expression in myoblasts exposed to genotoxic stress.

Authors:  Marta Simonatto; Lorenzo Giordani; Fabrizia Marullo; Giulia Claudia Minetti; Pier Lorenzo Puri; Lucia Latella
Journal:  Cell Cycle       Date:  2011-07-15       Impact factor: 4.534

Review 3.  Surviving the sun: repair and bypass of DNA UV lesions.

Authors:  Wei Yang
Journal:  Protein Sci       Date:  2011-11       Impact factor: 6.725

4.  IOP1 protein is an external component of the human cytosolic iron-sulfur cluster assembly (CIA) machinery and functions in the MMS19 protein-dependent CIA pathway.

Authors:  Mineaki Seki; Yukiko Takeda; Kazuhiro Iwai; Kiyoji Tanaka
Journal:  J Biol Chem       Date:  2013-04-12       Impact factor: 5.157

5.  Cullin-RING ubiquitin E3 ligase regulation by the COP9 signalosome.

Authors:  Simone Cavadini; Eric S Fischer; Richard D Bunker; Alessandro Potenza; Gondichatnahalli M Lingaraju; Kenneth N Goldie; Weaam I Mohamed; Mahamadou Faty; Georg Petzold; Rohan E J Beckwith; Ritesh B Tichkule; Ulrich Hassiepen; Wassim Abdulrahman; Radosav S Pantelic; Syota Matsumoto; Kaoru Sugasawa; Henning Stahlberg; Nicolas H Thomä
Journal:  Nature       Date:  2016-03-31       Impact factor: 49.962

6.  The human DNA ends proteome uncovers an unexpected entanglement of functional pathways.

Authors:  Vivien Berthelot; Gildas Mouta-Cardoso; Nadia Hégarat; François Guillonneau; Jean-Christophe François; Carine Giovannangeli; Danièle Praseuth; Filippo Rusconi
Journal:  Nucleic Acids Res       Date:  2016-02-25       Impact factor: 16.971

Review 7.  Epigenetic regulation of genomic integrity.

Authors:  Angela K Deem; Xuan Li; Jessica K Tyler
Journal:  Chromosoma       Date:  2012-01-17       Impact factor: 4.316

8.  Interrogation of nucleotide excision repair capacity: impact on platinum-based cancer therapy.

Authors:  Jennifer N Earley; John J Turchi
Journal:  Antioxid Redox Signal       Date:  2011-01-23       Impact factor: 8.401

Review 9.  Expanding molecular roles of UV-DDB: Shining light on genome stability and cancer.

Authors:  Maria Beecher; Namrata Kumar; Sunbok Jang; Vesna Rapić-Otrin; Bennett Van Houten
Journal:  DNA Repair (Amst)       Date:  2020-04-27

Review 10.  Nucleotide Excision Repair: Finely Tuned Molecular Orchestra of Early Pre-incision Events.

Authors:  Qianzheng Zhu; Altaf A Wani
Journal:  Photochem Photobiol       Date:  2016-11-17       Impact factor: 3.421

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