Literature DB >> 20366181

Concerted hydrogen-bond dynamics in the transport mechanism of the hydrated proton: a first-principles molecular dynamics study.

Timothy C Berkelbach1, Hee-Seung Lee, Mark E Tuckerman.   

Abstract

First-principles molecular dynamics calculations performed in a fully converged basis set are used to reveal new details about the mechanism of the anomalous proton-transport process in water, a fundamental question dating back over 200 years. By separating actual structural diffusion from simple rattling events, wherein a proton shuttles forth and back in a hydrogen bond, it is found that the former are driven by a concerted mechanism in which hydronium begins to accept a hydrogen bond from a donor water molecule while the proton-receiving water molecule simultaneously loses one of its acceptor hydrogen bonds. The kinetics of the process are found to be in good agreement with recent experiments.

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Year:  2009        PMID: 20366181     DOI: 10.1103/PhysRevLett.103.238302

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  24 in total

1.  Proton transfer through the water gossamer.

Authors:  Ali Hassanali; Federico Giberti; Jérôme Cuny; Thomas D Kühne; Michele Parrinello
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-18       Impact factor: 11.205

2.  The mechanism of proton conduction in phosphoric acid.

Authors:  Linas Vilčiauskas; Mark E Tuckerman; Gabriel Bester; Stephen J Paddison; Klaus-Dieter Kreuer
Journal:  Nat Chem       Date:  2012-04-22       Impact factor: 24.427

3.  Classical Molecular Dynamics with Mobile Protons.

Authors:  Themis Lazaridis; Gerhard Hummer
Journal:  J Chem Inf Model       Date:  2017-11-14       Impact factor: 4.956

4.  Water at hydrophobic interfaces delays proton surface-to-bulk transfer and provides a pathway for lateral proton diffusion.

Authors:  Chao Zhang; Denis G Knyazev; Yana A Vereshaga; Emiliano Ippoliti; Trung Hai Nguyen; Paolo Carloni; Peter Pohl
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-06       Impact factor: 11.205

5.  Application of the SCC-DFTB method to neutral and protonated water clusters and bulk water.

Authors:  Puja Goyal; Marcus Elstner; Qiang Cui
Journal:  J Phys Chem B       Date:  2011-04-28       Impact factor: 2.991

6.  Understanding and Tracking the Excess Proton in Ab Initio Simulations; Insights from IR Spectra.

Authors:  Chenghan Li; Jessica M J Swanson
Journal:  J Phys Chem B       Date:  2020-06-24       Impact factor: 2.991

7.  Multiscale simulation reveals a multifaceted mechanism of proton permeation through the influenza A M2 proton channel.

Authors:  Ruibin Liang; Hui Li; Jessica M J Swanson; Gregory A Voth
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-16       Impact factor: 11.205

Review 8.  Protons and Hydroxide Ions in Aqueous Systems.

Authors:  Noam Agmon; Huib J Bakker; R Kramer Campen; Richard H Henchman; Peter Pohl; Sylvie Roke; Martin Thämer; Ali Hassanali
Journal:  Chem Rev       Date:  2016-06-17       Impact factor: 60.622

9.  On the recombination of hydronium and hydroxide ions in water.

Authors:  Ali Hassanali; Meher K Prakash; Hagai Eshet; Michele Parrinello
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

10.  OH- and H3O+ Diffusion in Model AEMs and PEMs at Low Hydration: Insights from Ab Initio Molecular Dynamics.

Authors:  Tamar Zelovich; Mark E Tuckerman
Journal:  Membranes (Basel)       Date:  2021-05-12
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