Literature DB >> 20358601

A maternally inherited chromosome 18q22.1 deletion in a male with late-presenting diaphragmatic hernia and microphthalmia-evaluation of DSEL as a candidate gene for the diaphragmatic defect.

Hatem Zayed1, Ryan Chao, Ali Moshrefi, Nelson Lopezjimenez, Allen Delaney, Justin Chen, Gary M Shaw, Anne M Slavotinek.   

Abstract

Using an Affymetrix GeneChip(R) Human Mapping 100K Set to study a patient with a late-presenting, right-sided diaphragmatic hernia and microphthalmia, we found a maternally inherited deletion that was 2.7 Mb in size at chromosome 18q22.1. Mapping of this deletion using fluorescence in situ hybridization revealed three deleted genes-CDH19, DSEL, and TXNDC10, and one gene that contained the deletion breakpoint, CCDC102B. We selected DSEL for further study in 125 patients with diaphragmatic hernias, as it is involved in the synthesis of decorin, a protein that is required for normal collagen formation and that is upregulated during myogenesis. We found p.Met14Ile in an unrelated patient with a late-presenting, anterior diaphragmatic hernia. In the murine diaphragm, Dsel was only weakly expressed at the time of diaphragm closure and its expression in C2C12 myoblast cells did not change significantly during myoblast differentiation, thus reducing the likelihood that the gene is involved in myogenesis of the diaphragm. Although it is possible that the 18q22.1 deletion and haploinsufficiency for DSEL contributed to the diaphragmatic defect in the patient, a definite role for DSEL and decorin in the formation of the collagen-containing, central tendon of the diaphragm has not yet been established. (c) 2010 Wiley-Liss, Inc.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20358601      PMCID: PMC2922899          DOI: 10.1002/ajmg.a.33341

Source DB:  PubMed          Journal:  Am J Med Genet A        ISSN: 1552-4825            Impact factor:   2.802


  33 in total

1.  Genotyping over 100,000 SNPs on a pair of oligonucleotide arrays.

Authors:  Hajime Matsuzaki; Shoulian Dong; Halina Loi; Xiaojun Di; Guoying Liu; Earl Hubbell; Jane Law; Tam Berntsen; Monica Chadha; Henry Hui; Geoffrey Yang; Giulia C Kennedy; Teresa A Webster; Simon Cawley; P Sean Walsh; Keith W Jones; Stephen P A Fodor; Rui Mei
Journal:  Nat Methods       Date:  2004-11       Impact factor: 28.547

2.  Use of Affymetrix mapping arrays in the diagnosis of gene copy number variation.

Authors:  Allen D Delaney; Hong Qian; Jan M Friedman; Marco A Marra
Journal:  Curr Protoc Hum Genet       Date:  2008-10

3.  Synthesis of proteoglycans is augmented in dystrophic mdx mouse skeletal muscle.

Authors:  S Cáceres; C Cuellar; J C Casar; J Garrido; L Schaefer; H Kresse; E Brandan
Journal:  Eur J Cell Biol       Date:  2000-03       Impact factor: 4.492

4.  Biosynthesis of dermatan sulfate: chondroitin-glucuronate C5-epimerase is identical to SART2.

Authors:  Marco Maccarana; Benny Olander; Johan Malmström; Kerstin Tiedemann; Ruedi Aebersold; Ulf Lindahl; Jin-Ping Li; Anders Malmström
Journal:  J Biol Chem       Date:  2006-02-27       Impact factor: 5.157

5.  Decorin-type I collagen interaction. Presence of separate core protein-binding domains.

Authors:  E Schönherr; H Hausser; L Beavan; H Kresse
Journal:  J Biol Chem       Date:  1995-04-14       Impact factor: 5.157

Review 6.  Genetic factors in congenital diaphragmatic hernia.

Authors:  A M Holder; M Klaassens; D Tibboel; A de Klein; B Lee; D A Scott
Journal:  Am J Hum Genet       Date:  2007-04-04       Impact factor: 11.025

7.  Identification and characterization of a novel thioredoxin-related transmembrane protein of the endoplasmic reticulum.

Authors:  Johannes Haugstetter; Thomas Blicher; Lars Ellgaard
Journal:  J Biol Chem       Date:  2004-12-28       Impact factor: 5.157

8.  Structural chromosome anomalies in congenital diaphragmatic hernia.

Authors:  D T Howe; M D Kilby; H Sirry; G M Barker; E Roberts; E V Davison; J Mchugo; M J Whittle
Journal:  Prenat Diagn       Date:  1996-11       Impact factor: 3.050

9.  A novel CpG-associated brain-expressed candidate gene for chromosome 18q-linked bipolar disorder.

Authors:  D Goossens; S Van Gestel; S Claes; P De Rijk; D Souery; I Massat; D Van den Bossche; H Backhovens; J Mendlewicz; C Van Broeckhoven; J Del-Favero
Journal:  Mol Psychiatry       Date:  2003-01       Impact factor: 15.992

10.  Candidate genes for congenital diaphragmatic hernia from animal models: sequencing of FOG2 and PDGFRalpha reveals rare variants in diaphragmatic hernia patients.

Authors:  S B Bleyl; A Moshrefi; G M Shaw; Y Saijoh; G C Schoenwolf; L A Pennacchio; A M Slavotinek
Journal:  Eur J Hum Genet       Date:  2007-06-13       Impact factor: 4.246

View more
  17 in total

1.  Expanding the phenotypic spectrum of PORCN variants in two males with syndromic microphthalmia.

Authors:  Paul D Brady; Hilde Van Esch; Nathalie Fieremans; Guy Froyen; Anne Slavotinek; Jan Deprest; Koenraad Devriendt; Joris R Vermeesch
Journal:  Eur J Hum Genet       Date:  2014-07-16       Impact factor: 4.246

2.  Prioritization of Candidate Genes for Congenital Diaphragmatic Hernia in a Critical Region on Chromosome 4p16 using a Machine-Learning Algorithm.

Authors:  Danielle A Callaway; Ian M Campbell; Samantha R Stover; Andres Hernandez-Garcia; Shalini N Jhangiani; Jaya Punetha; Ingrid S Paine; Jennifer E Posey; Donna Muzny; Kevin P Lally; James R Lupski; Chad A Shaw; Caraciolo J Fernandes; Daryl A Scott
Journal:  J Pediatr Genet       Date:  2018-05-30

Review 3.  A clinical-pathogenetic approach on associated anomalies and chromosomal defects supports novel candidate critical regions and genes for gastroschisis.

Authors:  Victor M Salinas-Torres; Rafael A Salinas-Torres; Ricardo M Cerda-Flores; Hugo L Gallardo-Blanco; Laura E Martínez-de-Villarreal
Journal:  Pediatr Surg Int       Date:  2018-08-09       Impact factor: 1.827

Review 4.  Biosynthesis of glycosaminoglycans: associated disorders and biochemical tests.

Authors:  Florin Sasarman; Catalina Maftei; Philippe M Campeau; Catherine Brunel-Guitton; Grant A Mitchell; Pierre Allard
Journal:  J Inherit Metab Dis       Date:  2015-12-21       Impact factor: 4.982

Review 5.  Introducing Thioredoxin-Related Transmembrane Proteins: Emerging Roles of Human TMX and Clinical Implications.

Authors:  Yoshiyuki Matsuo
Journal:  Antioxid Redox Signal       Date:  2021-12-07       Impact factor: 7.468

Review 6.  The Specific Role of Dermatan Sulfate as an Instructive Glycosaminoglycan in Tissue Development.

Authors:  Shuji Mizumoto; Shuhei Yamada
Journal:  Int J Mol Sci       Date:  2022-07-05       Impact factor: 6.208

Review 7.  Human genetic disorders caused by mutations in genes encoding biosynthetic enzymes for sulfated glycosaminoglycans.

Authors:  Shuji Mizumoto; Shiro Ikegawa; Kazuyuki Sugahara
Journal:  J Biol Chem       Date:  2013-03-01       Impact factor: 5.157

8.  A male with unilateral microphthalmia reveals a role for TMX3 in eye development.

Authors:  Ryan Chao; Linda Nevin; Pooja Agarwal; Jan Riemer; Xiaoyang Bai; Allen Delaney; Matthew Akana; Nelson JimenezLopez; Tanya Bardakjian; Adele Schneider; Nicolas Chassaing; Daniel F Schorderet; David FitzPatrick; Pui-yan Kwok; Lars Ellgaard; Douglas B Gould; Yan Zhang; Jarema Malicki; Herwig Baier; Anne Slavotinek
Journal:  PLoS One       Date:  2010-05-11       Impact factor: 3.240

9.  Array comparative genomic hybridization analysis in patients with anophthalmia, microphthalmia, and coloboma.

Authors:  Gordana Raca; Craig A Jackson; Laimutis Kucinskas; Berta Warman; Joseph T C Shieh; Adele Schneider; Tanya M Bardakjian; Lisa A Schimmenti
Journal:  Genet Med       Date:  2011-05       Impact factor: 8.822

10.  Quantitative genomics of 30 complex phenotypes in Wagyu x Angus F₁ progeny.

Authors:  Lifan Zhang; Jennifer J Michal; James V O'Fallon; Zengxiang Pan; Charles T Gaskins; Jerry J Reeves; Jan R Busboom; Xiang Zhou; Bo Ding; Michael V Dodson; Zhihua Jiang
Journal:  Int J Biol Sci       Date:  2012-06-12       Impact factor: 6.580

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.