Literature DB >> 20356830

Scaling of morphogen gradients by an expansion-repression integral feedback control.

Danny Ben-Zvi1, Naama Barkai.   

Abstract

Despite substantial size variations, proportions of the developing body plan are maintained with a remarkable precision. Little is known about the mechanisms that ensure this adaptation (scaling) of pattern with size. Most models of patterning by morphogen gradients do not support scaling. In contrast, we show that scaling arises naturally in a general feedback topology, in which the range of the morphogen gradient increases with the abundance of some diffusible molecule, whose production, in turn, is repressed by morphogen signaling. We term this mechanism "expansion-repression" and show that it can function within a wide range of biological scenarios. The expansion-repression scaling mechanism is analogous to an integral-feedback controller, a key concept in engineering that is likely to be instrumental also in maintaining biological homeostasis.

Mesh:

Year:  2010        PMID: 20356830      PMCID: PMC2872437          DOI: 10.1073/pnas.0912734107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

Review 1.  Negative feedback mechanisms and their roles during pattern formation.

Authors:  N Perrimon; A P McMahon
Journal:  Cell       Date:  1999-04-02       Impact factor: 41.582

Review 2.  Feedback control of intercellular signalling in development.

Authors:  M Freeman
Journal:  Nature       Date:  2000-11-16       Impact factor: 49.962

3.  Self-enhanced ligand degradation underlies robustness of morphogen gradients.

Authors:  Avigdor Eldar; Dalia Rosin; Ben-Zion Shilo; Naama Barkai
Journal:  Dev Cell       Date:  2003-10       Impact factor: 12.270

Review 4.  Patterns in evolution: veins of the Drosophila wing.

Authors:  Michèle Crozatier; Bruno Glise; Alain Vincent
Journal:  Trends Genet       Date:  2004-10       Impact factor: 11.639

Review 5.  Shaping BMP morphogen gradients in the Drosophila embryo and pupal wing.

Authors:  Michael B O'Connor; David Umulis; Hans G Othmer; Seth S Blair
Journal:  Development       Date:  2006-01       Impact factor: 6.868

6.  Regulation of ADMP and BMP2/4/7 at opposite embryonic poles generates a self-regulating morphogenetic field.

Authors:  Bruno Reversade; E M De Robertis
Journal:  Cell       Date:  2005-12-16       Impact factor: 41.582

7.  Robustness in simple biochemical networks.

Authors:  N Barkai; S Leibler
Journal:  Nature       Date:  1997-06-26       Impact factor: 49.962

8.  Model for the robust establishment of precise proportions in the early Drosophila embryo.

Authors:  Tinri Aegerter-Wilmsen; Christof M Aegerter; Ton Bisseling
Journal:  J Theor Biol       Date:  2005-01-01       Impact factor: 2.691

9.  The Spemann organizer signal noggin binds and inactivates bone morphogenetic protein 4.

Authors:  L B Zimmerman; J M De Jesús-Escobar; R M Harland
Journal:  Cell       Date:  1996-08-23       Impact factor: 41.582

10.  Robustness of the BMP morphogen gradient in Drosophila embryonic patterning.

Authors:  Avigdor Eldar; Ruslan Dorfman; Daniel Weiss; Hilary Ashe; Ben-Zion Shilo; Naama Barkai
Journal:  Nature       Date:  2002-09-19       Impact factor: 49.962

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  43 in total

Review 1.  Systems control of BMP morphogen flow in vertebrate embryos.

Authors:  Jean-Louis Plouhinec; Lise Zakin; Edward M De Robertis
Journal:  Curr Opin Genet Dev       Date:  2011-09-19       Impact factor: 5.578

2.  Studies of morphogens: keep calm and carry on.

Authors:  Angelike Stathopoulos; Dagmar Iber
Journal:  Development       Date:  2013-10       Impact factor: 6.868

Review 3.  Mechanisms of scaling in pattern formation.

Authors:  David M Umulis; Hans G Othmer
Journal:  Development       Date:  2013-12       Impact factor: 6.868

4.  Synthetic negative feedback circuits using engineered small RNAs.

Authors:  Ciarán L Kelly; Andreas W K Harris; Harrison Steel; Edward J Hancock; John T Heap; Antonis Papachristodoulou
Journal:  Nucleic Acids Res       Date:  2018-10-12       Impact factor: 16.971

Review 5.  Understanding morphogenetic growth control -- lessons from flies.

Authors:  Ortrud Wartlick; Peer Mumcu; Frank Jülicher; Marcos Gonzalez-Gaitan
Journal:  Nat Rev Mol Cell Biol       Date:  2011-08-18       Impact factor: 94.444

6.  Collective Space-Sensing Coordinates Pattern Scaling in Engineered Bacteria.

Authors:  Yangxiaolu Cao; Marc D Ryser; Stephen Payne; Bochong Li; Christopher V Rao; Lingchong You
Journal:  Cell       Date:  2016-04-21       Impact factor: 41.582

7.  How grass keeps growing: an integrated analysis of hormonal crosstalk in the maize leaf growth zone.

Authors:  Dirk De Vos; Hilde Nelissen; Hamada AbdElgawad; Els Prinsen; Jan Broeckhove; Dirk Inzé; Gerrit T S Beemster
Journal:  New Phytol       Date:  2019-12-24       Impact factor: 10.151

8.  Developmental biology: Segmentation within scale.

Authors:  Naama Barkai; Ben-Zion Shilo
Journal:  Nature       Date:  2012-12-19       Impact factor: 49.962

9.  Maintenance of mitochondrial oxygen homeostasis by cosubstrate compensation.

Authors:  Hao Yuan Kueh; Philipp Niethammer; Timothy J Mitchison
Journal:  Biophys J       Date:  2013-03-19       Impact factor: 4.033

Review 10.  The role of endocytosis during morphogenetic signaling.

Authors:  Marcos Gonzalez-Gaitan; Frank Jülicher
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-07-01       Impact factor: 10.005

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