Literature DB >> 20354517

Toward atomic accuracy in RNA design.

Eric Westhof1.   

Abstract

The introduction of new and accurate force fields for atom-atom interactions into the Rosetta framework allows the recovery of native-like RNA structures.

Mesh：

Substances：

Year:  2010        PMID： 20354517     DOI： 10.1038/nmeth0410-272

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


  8 in total

1.  RNA tertiary interactions in the large ribosomal subunit: the A-minor motif.

Authors:  P Nissen; J A Ippolito; N Ban; P B Moore; T A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-10       Impact factor: 11.205

Review 2.  The architectonics of programmable RNA and DNA nanostructures.

Authors:  Luc Jaeger; Arkadiusz Chworos
Journal:  Curr Opin Struct Biol       Date:  2006-07-14       Impact factor: 6.809

3.  Automated de novo prediction of native-like RNA tertiary structures.

Authors:  Rhiju Das; David Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-28       Impact factor: 11.205

4.  New metrics for comparing and assessing discrepancies between RNA 3D structures and models.

Authors:  Marc Parisien; José Almeida Cruz; Eric Westhof; François Major
Journal:  RNA       Date:  2009-08-26       Impact factor: 4.942

5.  A common motif organizes the structure of multi-helix loops in 16 S and 23 S ribosomal RNAs.

Authors:  N B Leontis; E Westhof
Journal:  J Mol Biol       Date:  1998-10-30       Impact factor: 5.469

Review 6.  C-H...O hydrogen bonding in biology.

Authors:  M C Wahl; M Sundaralingam
Journal:  Trends Biochem Sci       Date:  1997-03       Impact factor: 13.807

7.  Atomic accuracy in predicting and designing noncanonical RNA structure.

Authors:  Rhiju Das; John Karanicolas; David Baker
Journal:  Nat Methods       Date:  2010-02-28       Impact factor: 28.547

Review 8.  Frameworks for programming biological function through RNA parts and devices.

Authors:  Maung Nyan Win; Joe C Liang; Christina D Smolke
Journal:  Chem Biol       Date:  2009-03-27
  8 in total

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